RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 NOTUMQ6P988 496 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ZBTB49Q6ZSB9 765 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TPRG1Q6ZUI0 275 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ANO5Q75V66 913 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 PRSS42Q7Z5A4 293 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TRPT1Q86TN4 253 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 SPATA24Q86W54 205 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 PSTKQ8IV42 348 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 OR10T2Q8NGX3 314 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 SMPDL3BQ92485 455 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 FBXO32Q969P5 355 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 SNRNP40Q96DI7 357 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 C19orf60Q96EN9 201 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 DHTKD1Q96HY7 919 aaPredicted RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 PIWIL1Q96J94 861 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 GFI1Q99684 422 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 GPA33Q99795 319 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 DDX50Q9BQ39 737 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 SIKE1Q9BRV8 207 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 MTG1Q9BT17 334 aaPredicted RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 ZSCAN5AQ9BUG6 496 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 KATNB1Q9BVA0 655 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 MOV10L1Q9BXT6 1211 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 PKIBQ9C010 78 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 RAB33BQ9H082 229 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TMEM117Q9H0C3 514 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 VCX2Q9H322 139 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 BICC1Q9H694 974 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 HAUS4Q9H6D7 363 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 RPF1Q9H9Y2 349 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 FAM212BQ9NTI7 297 aaPredicted RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 SLC38A7Q9NVC3 462 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 KLHL8Q9P2G9 620 aaPredicted RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 YIPF1Q9Y548 306 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 PLEKHG2Q9H7P9 1386 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TRIM49BA6NDI0 452 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 C5orf51A6NDU8 294 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 ZSCAN5BA6NJL1 495 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 PRRG1O14668 218 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 RNF113AO15541 343 aaKnown RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 GPRIN2O60269 458 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 MFN2O95140 757 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 PGLSO95336 258 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CAVIN2O95810 425 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CSF2P04141 144 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 PATE4P0C8F1 98 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 ZNF18P17022 549 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 MSH3P20585 1137 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CYP2A7P20853 494 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 ITGA3P26006 1051 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CCND3P30281 292 aaPredicted RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 PKLRP30613 574 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CCR1P32246 355 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CETN2P41208 172 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 SUOXP51687 545 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 METAP1P53582 386 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CDH13P55290 713 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 SIRPAP78324 504 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CCDC173Q0VFZ6 552 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 HSPB3Q12988 150 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 SPP2Q13103 211 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 SNTB2Q13425 540 aaKnown RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 ARHGAP19Q14CB8 494 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 DUOXA1Q1HG43 343 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 TMEM30BQ3MIR4 351 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 SLC36A3Q495N2 470 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CCDC152Q4G0S7 254 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CFAP221Q4G0U5 840 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 IQCCQ4KMZ1 466 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 ZC2HC1CQ53FD0 456 aaPredicted RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 PMF1Q6P1K2 205 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 RBMS3Q6XE24 437 aaKnown RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 KIF6Q6ZMV9 814 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 WDR88Q6ZMY6 472 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 CLEC17AQ6ZS10 378 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 ZNF534Q76KX8 674 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 SLC22A9Q8IVM8 553 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 APLFQ8IW19 511 aaPredicted RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 MYOCDQ8IZQ8 938 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 STEAP2Q8NFT2 490 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 AKR7LQ8NHP1 331 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 HEXDCQ8WVB3 486 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 C17orf50Q8WW18 174 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 FCAMRQ8WWV6 532 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 ATL1Q8WXF7 558 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 AP2M1Q96CW1 435 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 LGALS12Q96DT0 336 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 RPGRIP1Q96KN7 1286 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 PRMT6Q96LA8 375 aaPredicted RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 ZNF396Q96N95 335 aaPredicted RBP3.45□□□□□ -1.86
VPS50-209ENST00000467326 LRRC3BQ96PB8 259 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 USP28Q96RU2 1077 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 DDOQ99489 341 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 LITAFQ99732 161 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 BCL7BQ9BQE9 202 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 LZTS2Q9BRK4 669 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 FAM213AQ9BRX8 229 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 BARHL1Q9BZE3 327 aa3.45□□□□□ -1.86
VPS50-209ENST00000467326 FAM192AQ9GZU8 254 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms