RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 STMND1H3BQB6 276 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 PLPP1O14494 284 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 HDAC3O15379 428 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 ERI3O43414 337 aaKnown RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 RGS14O43566 566 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 FOXS1O43638 330 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 BRINP1O60477 761 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 GALR3O60755 368 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 EDF1O60869 148 aaKnown RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 KIAA0754O94854 1291 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 ETHE1O95571 254 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 STATHP02808 62 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF888P0CJ79 500 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF28P17035 718 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 SERPINB3P29508 390 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 SLC5A2P31639 672 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 ABHD18Q0P651 414 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 SPIN4Q56A73 249 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 SGO1Q5FBB7 561 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 PRAMEF17Q5VTA0 474 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 TTLL10Q6ZVT0 673 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 RNF175Q8N4F7 328 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 SLC38A9Q8NBW4 561 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 RGMAQ96B86 450 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 MTFMTQ96DP5 389 aaKnown RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 CLIP3Q96DZ5 547 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 C19orf60Q96EN9 201 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 QRFPRQ96P65 431 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 F2RL3Q96RI0 385 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 NPLQ9BXD5 320 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF717Q9BY31 904 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 OR51B5Q9H339 312 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 PRDM7Q9NQW5 492 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 PNPOQ9NVS9 261 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 DHCR7Q9UBM7 475 aaKnown RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 DKK4Q9UBT3 224 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 SLC12A4Q9UP95 1085 aa14.42□□□□□ -0.1
NPHP4-205ENST00000466897 MRPS2Q9Y399 296 aaKnown RBP14.42□□□□□ -0.1
NPHP4-205ENST00000466897 TRPC5OSA6NMA1 111 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 TCP11X1B4DZS4 312 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 C4orf51C9J302 202 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 MEN1O00255 615 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 PIP5K1BO14986 540 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 KLHL18O94889 574 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 NTRK1P04629 796 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 KLK3P07288 261 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 PIM1P11309 404 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 ALOX15P16050 662 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 AVPR1BP47901 424 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 RAP1GDS1P52306 607 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 TBL3Q12788 808 aaKnown RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 DSG2Q14126 1118 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 TBC1D25Q3MII6 688 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 UBE3DQ7Z6J8 389 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 PDSS2Q86YH6 399 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 WDR75Q8IWA0 830 aaKnown RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 METTL4Q8N3J2 472 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 ZCCHC7Q8N3Z6 543 aaKnown RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 ZCCHC10Q8TBK6 192 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 STON2Q8WXE9 905 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 C11orf24Q96F05 449 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 SERINC2Q96SA4 455 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 HBEGFQ99075 208 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 C17orf62Q9BQA9 187 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 SIKE1Q9BRV8 207 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 DDX31Q9H8H2 851 aaKnown RBP14.41□□□□□ -0.1
NPHP4-205ENST00000466897 MEAF6Q9HAF1 191 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 LHX9Q9NQ69 397 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 RIC8BQ9NVN3 520 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 ANGPTL2Q9UKU9 493 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 FIS1Q9Y3D6 152 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 AK5Q9Y6K8 562 aa14.41□□□□□ -0.1
NPHP4-205ENST00000466897 SPTBN2O15020 2390 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 LSM1O15116 133 aaKnown RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 VPS4BO75351 444 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 TGDSO95455 350 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 ACPPP15309 386 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 IL1RNP18510 177 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 SPINK2P20155 84 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 ITGAXP20702 1163 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 AGXTP21549 392 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 HIST1H1TP22492 207 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 BSGP35613 385 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 PLA2G16P53816 162 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 MTTPP55157 894 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 RAB8AP61006 207 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 SNRPNP63162 240 aaKnown RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 DCDP81605 110 aaKnown RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 BTKQ06187 659 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 IMPG1Q17R60 797 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 SMU1Q2TAY7 513 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 AP5B1Q2VPB7 878 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 TUBB8Q3ZCM7 444 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 DEFB134Q4QY38 66 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 FAM219BQ5XKK7 198 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 OR4C11Q6IEV9 310 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 GALNT18Q6P9A2 607 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 C6orf15Q6UXA7 325 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 Q6ZSR9 355 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 MED25Q71SY5 747 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms