RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ASPDHA6ND91 283 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 PSMD12O00232 456 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-206ENST00000466532 NEURL1O76050 574 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 SP1P08047 785 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 MGAT5Q09328 741 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 HYAL2Q12891 473 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 FRG1Q14331 258 aaKnown RBP17.96■□□□□ 0.47
COL9A3-206ENST00000466532 ZNF460Q14592 562 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 C3AR1Q16581 482 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 KRTCAP3Q53RY4 240 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 SLC25A25Q6KCM7 469 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 NXPE4Q6UWF7 544 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 RPTNQ6XPR3 784 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 ZC3HC1Q86WB0 502 aaKnown RBP17.96■□□□□ 0.47
COL9A3-206ENST00000466532 NKAPQ8N5F7 415 aaKnown RBP17.96■□□□□ 0.47
COL9A3-206ENST00000466532 THAP3Q8WTV1 239 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-206ENST00000466532 FRMD6Q96NE9 622 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 RUNDC3BQ96NL0 473 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 RHBGQ9H310 441 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 KLHL31Q9H511 634 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 RUBCNLQ9H714 662 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 CLK4Q9HAZ1 481 aaKnown RBP17.96■□□□□ 0.47
COL9A3-206ENST00000466532 TINAGQ9UJW2 476 aa17.96■□□□□ 0.47
COL9A3-206ENST00000466532 SAGE2PA6NJ88 616 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 NPIPA5E9PKD4 350 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 ESRRAP11474 423 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-206ENST00000466532 RNH1P13489 461 aaKnown RBP17.95■□□□□ 0.46
COL9A3-206ENST00000466532 MAOAP21397 527 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 TPP2P29144 1249 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-206ENST00000466532 MAPKAPK3Q16644 382 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 TOR1AIP1Q5JTV8 583 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 ZNF468Q5VIY5 522 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-206ENST00000466532 BNC2Q6ZN30 1099 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-206ENST00000466532 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-206ENST00000466532 MCEMP1Q8IX19 187 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 FBXO36Q8NEA4 188 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 PRDM9Q9NQV7 894 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 NPIPA1Q9UND3 350 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 OARD1Q9Y530 152 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 EML6Q6ZMW3 1958 aa17.95■□□□□ 0.46
COL9A3-206ENST00000466532 TCRBV16S1A1N1A0A5B0 115 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 A8MUA0 341 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 C4orf51C9J302 202 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 CDK2AP1O14519 115 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 SEC31AO94979 1220 aaKnown RBP17.94■□□□□ 0.46
COL9A3-206ENST00000466532 SERPINA6P08185 405 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 SMIM10L1P0DMW3 83 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 HTR1EP28566 365 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 TAS2R39P59534 338 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 CDKL1Q00532 357 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 PDIA2Q13087 525 aaKnown RBP17.94■□□□□ 0.46
COL9A3-206ENST00000466532 FRA10AC1Q70Z53 315 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 CREG2Q8IUH2 290 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 CA13Q8N1Q1 262 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 CREB3L4Q8TEY5 395 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 SMIM10Q96HG1 83 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 TRIM31Q9BZY9 425 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 AICDAQ9GZX7 198 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 KCNF1Q9H3M0 494 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 NECTIN3Q9NQS3 549 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 CTNNAL1Q9UBT7 734 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 ZNF835Q9Y2P0 537 aa17.94■□□□□ 0.46
COL9A3-206ENST00000466532 IGKV3D-11A0A0A0MRZ8 115 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 NME2P1O60361 137 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 SLC25A12O75746 678 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 WDR47O94967 919 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 NME2P22392 152 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 CYB561P49447 251 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 HNMTP50135 292 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 MLF1P58340 268 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 ADORA2A-AS1P86434 159 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 FASTKD3Q14CZ7 662 aaKnown RBP17.93■□□□□ 0.46
COL9A3-206ENST00000466532 TSNQ15631 228 aaKnown RBP17.93■□□□□ 0.46
COL9A3-206ENST00000466532 ZNF630Q2M218 657 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-206ENST00000466532 XKRXQ6PP77 449 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 ADAMTSL2Q86TH1 951 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 SPPL2CQ8IUH8 684 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 ARMC2Q8NEN0 867 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 NFAM1Q8NET5 270 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-206ENST00000466532 ANKRD49Q8WVL7 239 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 CHST11Q9NPF2 352 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 CSMD1Q96PZ7 3565 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 PKDREJQ9NTG1 2253 aa17.93■□□□□ 0.46
COL9A3-206ENST00000466532 ASNA1O43681 348 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 C1GALT1C1LP0DN25 315 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 GNAZP19086 355 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 GDF5P43026 501 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 STXBP1P61764 594 aaKnown RBP17.92■□□□□ 0.46
COL9A3-206ENST00000466532 BTN3A2P78410 334 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 C18orf21Q32NC0 220 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-206ENST00000466532 Q6ZPB1 254 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-206ENST00000466532 SIAH3Q8IW03 269 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 CEP97Q8IW35 865 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL9A3-206ENST00000466532 VPS39Q96JC1 886 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 FAR2Q96K12 515 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 DEFB126Q9BYW3 111 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 GPAMQ9HCL2 828 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 NSMCE4AQ9NXX6 385 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms