RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 C4orf51C9J302 202 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 RDH16O75452 317 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 PRKAR1AP10644 381 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 PIK3CBP42338 1070 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 NAGLUP54802 743 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 RAB8AP61006 207 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 PHEXP78562 749 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 MAT1AQ00266 395 aaKnown RBP19.23■□□□□ 0.67
PTCD3-206ENST00000465560 LCP2Q13094 533 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 ZRSR2Q15696 482 aaKnown RBP19.23■□□□□ 0.67
PTCD3-206ENST00000465560 SYT16Q17RD7 645 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 LETMD1Q6P1Q0 360 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 C10orf107Q8IVU9 208 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 CCNYL1Q8N7R7 359 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 OR2L5Q8NG80 312 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 WDR20Q8TBZ3 569 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 STT3BQ8TCJ2 826 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 DMRT3Q9NQL9 472 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 C14orf105Q9NVL8 296 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 TRPS1Q9UHF7 1281 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 ZNF225Q9UK10 706 aa19.23■□□□□ 0.67
PTCD3-206ENST00000465560 ZNF860A6NHJ4 632 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 GOLGA6L10A6NI86 522 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 FFAR3O14843 346 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 GPR42O15529 346 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 ERI3O43414 337 aaKnown RBP19.22■□□□□ 0.67
PTCD3-206ENST00000465560 B3GALT4O96024 378 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 FURINP09958 794 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 ZGLP1P0C6A0 271 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 FOXL2P58012 376 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 DDX39BQ13838 428 aaKnown RBP19.22■□□□□ 0.67
PTCD3-206ENST00000465560 VWA2Q5GFL6 755 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 C10orf62Q5T681 223 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-206ENST00000465560 ATP1A1-AS1Q5TC04 95 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 TRIM40Q6P9F5 258 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 FRMD7Q6ZUT3 714 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 ADAMTS17Q8TE56 1095 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 MIEF2Q96C03 454 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 CMTM7Q96FZ5 175 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 CATSPER2Q96P56 530 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 YIPF2Q9BWQ6 316 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 TGIF2Q9GZN2 237 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 SOX17Q9H6I2 414 aaPredicted RBP19.22■□□□□ 0.67
PTCD3-206ENST00000465560 TMBIM4Q9HC24 238 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 PRM3Q9NNZ6 103 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 HCN3Q9P1Z3 774 aa19.22■□□□□ 0.67
PTCD3-206ENST00000465560 CDC14CA4D256 554 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 TRIM13O60858 407 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 OR4F21O95013 312 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 TGFB1P01137 390 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 UMODP07911 640 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 ETV4P43268 484 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 PKNOX1P55347 436 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 TGM3Q08188 693 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 SSPNQ14714 243 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 TMEM35AQ53FP2 167 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 CFAP157Q5JU67 520 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 FRG2Q64ET8 278 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 ABHD17CQ6PCB6 329 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 GPRIN3Q6ZVF9 776 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 TMEM151BQ8IW70 566 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 ZC3H7AQ8IWR0 971 aaKnown RBP19.21■□□□□ 0.67
PTCD3-206ENST00000465560 RNF175Q8N4F7 328 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 SRFBP1Q8NEF9 429 aaKnown RBP19.21■□□□□ 0.67
PTCD3-206ENST00000465560 OR51Q1Q8NH59 317 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 FAR2Q96K12 515 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 FRG2BQ96QU4 278 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 F2RL3Q96RI0 385 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 MTERF1Q99551 399 aaKnown RBP19.21■□□□□ 0.67
PTCD3-206ENST00000465560 CLK4Q9HAZ1 481 aaKnown RBP19.21■□□□□ 0.67
PTCD3-206ENST00000465560 PPT2Q9UMR5 302 aa19.21■□□□□ 0.67
PTCD3-206ENST00000465560 CACNA1GO43497 2377 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 A0A088AWK7 358 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 MAGEB17A8MXT2 336 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 AGPSO00116 658 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 FOXE1O00358 373 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-206ENST00000465560 TM9SF1O15321 606 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 ZNF10P21506 573 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-206ENST00000465560 ALDH3A1P30838 453 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 PLA2G16P53816 162 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 RPS13P62277 151 aaKnown RBP19.2■□□□□ 0.66
PTCD3-206ENST00000465560 BTN3A2P78410 334 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 KLC1Q07866 573 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 ASPHQ12797 758 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 IFT88Q13099 833 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 KHDRBS2Q5VWX1 349 aaKnown RBP19.2■□□□□ 0.66
PTCD3-206ENST00000465560 TTC19Q6DKK2 380 aaPredicted RBP19.2■□□□□ 0.66
PTCD3-206ENST00000465560 SHISA6Q6ZSJ9 500 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 CHSY3Q70JA7 882 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 HDXQ7Z353 690 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 RAB43Q86YS6 212 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 OR5T3Q8NGG3 340 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 AGAP11Q8TF27 550 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 THAP4Q8WY91 577 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 QRFPRQ96P65 431 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 KCNC2Q96PR1 638 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 MECRQ9BV79 373 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 ELOVL6Q9H5J4 265 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 PSD3Q9NYI0 1048 aa19.2■□□□□ 0.66
PTCD3-206ENST00000465560 POLHQ9Y253 713 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms