RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 CCNL2Q96S94 520 aaPredicted RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 NTMT1Q9BV86 223 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 B3GNT4Q9C0J1 378 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 REXO4Q9GZR2 422 aaKnown RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 RHBGQ9H310 441 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 PCSK5Q92824 1860 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 PDYNP01213 254 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 BPGMP07738 259 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 HBQ1P09105 142 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 CHN1P15882 459 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 AGXTP21549 392 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 BGNP21810 368 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
APTX-213ENST00000465003 CERS1P27544 350 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
APTX-213ENST00000465003 BTN3A2P78410 334 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 PWP1Q13610 501 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 FAAH2Q6GMR7 532 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 ZNF793Q6ZN11 406 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 PROKR1Q8TCW9 393 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 KIAA1143Q96AT1 154 aaPredicted RBP11.26□□□□□ -0.61
APTX-213ENST00000465003 THAP11Q96EK4 314 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 LRFN5Q96NI6 719 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 MS4A8Q9BY19 250 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 ANKHQ9HCJ1 492 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 DMRT3Q9NQL9 472 aa11.26□□□□□ -0.61
APTX-213ENST00000465003 A0A087WV48 116 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 PRPF4O43172 522 aaKnown RBP eCLIP11.25□□□□□ -0.61
APTX-213ENST00000465003 ITM2AO43736 263 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 SERPINA6P08185 405 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 ALOX12P18054 663 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 DNAJB13P59910 316 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 NDUFA9Q16795 377 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 FRG2Q64ET8 278 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 CCDC81Q6ZN84 652 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 UBE3DQ7Z6J8 389 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 CROCCP2Q86T23 111 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 NUDCD3Q8IVD9 361 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 CCDC126Q96EE4 140 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 PEX11GQ96HA9 241 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 ATP6V1G3Q96LB4 118 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 FRG2BQ96QU4 278 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 ZNF382Q96SR6 550 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 SH3GL2Q99962 352 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 C20orf27Q9GZN8 174 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 ELOVL6Q9H5J4 265 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 C9J4A7 227 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 FAM227AF5H4B4 570 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 H0YIV9 168 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 TXNDC9O14530 226 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 GALR3O60755 368 aaPredicted RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 ALOX12BO75342 701 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 CLEC3AO75596 197 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 KLF7O75840 302 aaPredicted RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 XCR1P46094 333 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 MAP7Q14244 749 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 ARL13AQ5H913 290 aaPredicted RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 METTL2BQ6P1Q9 378 aaKnown RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 CUZD1Q86UP6 607 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 GOLGA6L1Q8N7Z2 621 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 PPP1R14CQ8TAE6 165 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 METTL6Q8TCB7 284 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 SELENOMQ8WWX9 145 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 SPSB2Q99619 263 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 DPH1Q9BZG8 443 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 STMN4Q9H169 189 aaPredicted RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 VIPAS39Q9H9C1 493 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 SSU72Q9NP77 194 aaKnown RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 GPN3Q9UHW5 284 aaPredicted RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 MID2Q9UJV3 735 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 TCFL5Q9UL49 500 aa11.25□□□□□ -0.61
APTX-213ENST00000465003 FARSAQ9Y285 508 aaKnown RBP11.25□□□□□ -0.61
APTX-213ENST00000465003 MYOCOSA0A1B0GUC4 107 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 PLPP1O14494 284 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 TM9SF1O15321 606 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 UGDHO60701 494 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 PRKRAO75569 313 aaKnown RBP11.24□□□□□ -0.61
APTX-213ENST00000465003 ZWINTO95229 277 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 NSA2O95478 260 aaKnown RBP11.24□□□□□ -0.61
APTX-213ENST00000465003 ESRRBO95718 433 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 MLYCDO95822 493 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 DHRS4L1P0CG22 281 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 NEFHP12036 1026 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 PTPN4P29074 926 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 HMOX2P30519 316 aa11.24□□□□□ -0.61
APTX-213ENST00000465003 OTX2P32243 289 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms