RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ECE2O60344 883 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 SELENOFO60613 162 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 ANKRD34CP0C6C1 535 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 ACADSP16219 412 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 CTNNA2P26232 953 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 PIK3R1P27986 724 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 NPBWR1P48145 328 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 RPP38P78345 283 aaKnown RBP4.83□□□□□ -1.64
PTCD3-205ENST00000464541 CASC4Q6P4E1 433 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 ANKRD46Q86W74 232 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 OR52B6Q8NGF0 335 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 OR2L2Q8NH16 312 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 BSCL2Q96G97 398 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-205ENST00000464541 MLPHQ9BV36 600 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-205ENST00000464541 SLCO1C1Q9NYB5 712 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 THAP10Q9P2Z0 257 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-205ENST00000464541 MRPS18CQ9Y3D5 142 aaKnown RBP4.83□□□□□ -1.64
PTCD3-205ENST00000464541 IGLV4-3A0A075B6K6 122 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 C2orf92A0A1B0GVN3 265 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 RTCAO00442 366 aaKnown RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 TNFSF12O43508 249 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 FEN1P39748 380 aaKnown RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 FKBP3Q00688 224 aaKnown RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 ARMCX4Q5H9R4 360 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 P2RY8Q86VZ1 359 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 DND1Q8IYX4 353 aaKnown RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 SIX6OS1Q8N1H7 587 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 AFAP1L1Q8TED9 768 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 CHPT1Q8WUD6 406 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 C11orf52Q96A22 123 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 SGF29Q96ES7 293 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 FOXN4Q96NZ1 517 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 SOSTQ9BQB4 213 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 ATG101Q9BSB4 218 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 CHCHD5Q9BSY4 110 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 THUMPD3Q9BV44 507 aaKnown RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 RAB11FIP5Q9BXF6 653 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 DPEP2Q9H4A9 486 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 FNDC4Q9H6D8 234 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 GTSE1Q9NYZ3 720 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 VPS18Q9P253 973 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 DBF4Q9UBU7 674 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-205ENST00000464541 ZNF510Q9Y2H8 683 aa4.82□□□□□ -1.64
PTCD3-205ENST00000464541 PFASO15067 1338 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 KBTBD13C9JR72 458 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 POP4O95707 220 aaKnown RBP4.81□□□□□ -1.64
PTCD3-205ENST00000464541 RIGQ13278 110 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 PTK6Q13882 451 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 ZNF146Q15072 292 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 TCTEX1D4Q5JR98 221 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 MPP7Q5T2T1 576 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 Q6ZVQ6 151 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 C5orf24Q7Z6I8 188 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 RNF130Q86XS8 419 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 ABHD12Q8N2K0 398 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 SPPL2AQ8TCT8 520 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-205ENST00000464541 CKAP2Q8WWK9 683 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 EXOC4Q96A65 974 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 TRIM7Q9C029 511 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 LSG1Q9H089 658 aaKnown RBP4.81□□□□□ -1.64
PTCD3-205ENST00000464541 CDH7Q9ULB5 785 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 NCKAP1Q9Y2A7 1128 aa4.81□□□□□ -1.64
PTCD3-205ENST00000464541 OOEPA6NGQ2 149 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 INPP4BO15327 924 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 DLATP10515 647 aaKnown RBP4.8□□□□□ -1.64
PTCD3-205ENST00000464541 PCP11498 1178 aaKnown RBP4.8□□□□□ -1.64
PTCD3-205ENST00000464541 EEF2P13639 858 aaKnown RBP4.8□□□□□ -1.64
PTCD3-205ENST00000464541 GATA2P23769 480 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-205ENST00000464541 OXTRP30559 389 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 OR3A1P47881 315 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 CRYBA2P53672 197 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 GCKRQ14397 625 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 SPINK14Q6IE38 97 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 SLC27A4Q6P1M0 643 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 CDC20BQ86Y33 519 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 MR1Q95460 341 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 PRMT1Q99873 361 aaKnown RBP4.8□□□□□ -1.64
PTCD3-205ENST00000464541 DCTN5Q9BTE1 182 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 GPR173Q9NS66 373 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 PLCL2Q9UPR0 1127 aa4.8□□□□□ -1.64
PTCD3-205ENST00000464541 TDRD15B5MCY1 1934 aaKnown RBP4.8□□□□□ -1.64
PTCD3-205ENST00000464541 LRCH4O75427 683 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 HSP90AB1P08238 724 aaKnown RBP4.79□□□□□ -1.64
PTCD3-205ENST00000464541 SLC1A3P43003 542 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 FOLH1Q04609 750 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 FCHO2Q0JRZ9 810 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 LRRC37A5PQ49AS3 106 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 GALNTL5Q7Z4T8 443 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 SLC47A2Q86VL8 602 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 KLHL7Q8IXQ5 586 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 LMNTD2Q8IXW0 634 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 ZC3H3Q8IXZ2 948 aaKnown RBP4.79□□□□□ -1.64
PTCD3-205ENST00000464541 POM121L12Q8N7R1 296 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 ATAD1Q8NBU5 361 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 HEXA-AS1Q9H8Q6 139 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 UBQLN2Q9UHD9 624 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 GPR132Q9UNW8 380 aa4.79□□□□□ -1.64
PTCD3-205ENST00000464541 PCDHGA1Q9Y5H4 931 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms