RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ZRSR2Q15696 482 aaKnown RBP17.7■□□□□ 0.42
SF3A1-205ENST00000463818 TOR1AIP1Q5JTV8 583 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 SPINK14Q6IE38 97 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 SLCO4C1Q6ZQN7 724 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 MAATS1Q7Z4T9 603 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 ZGRF1Q86YA3 2104 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 KLHDC8AQ8IYD2 350 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 SLC5A8Q8N695 610 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 ELP5Q8TE02 316 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 RELTQ969Z4 430 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 SIGLEC12Q96PQ1 595 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 AICDAQ9GZX7 198 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 CDCP1Q9H5V8 836 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 WHRNQ9P202 907 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 SEC14L3Q9UDX4 400 aa17.7■□□□□ 0.42
SF3A1-205ENST00000463818 NCF1BA6NI72 391 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-205ENST00000463818 NCF1CA8MVU1 366 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-205ENST00000463818 C4orf51C9J302 202 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 PSMD12O00232 456 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-205ENST00000463818 EIF3HO15372 352 aaKnown RBP eCLIP17.69■□□□□ 0.42
SF3A1-205ENST00000463818 WISP2O76076 250 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 RNH1P13489 461 aaKnown RBP17.69■□□□□ 0.42
SF3A1-205ENST00000463818 NCF1P14598 390 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-205ENST00000463818 GNAZP19086 355 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 SLC6A12P48065 614 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 TAS2R50P59544 299 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 TGFBIQ15582 683 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 OR1C1Q15619 314 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 QSOX2Q6ZRP7 698 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 MDS2Q8NDY4 140 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 SPATA4Q8NEY3 305 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 CDKL2Q92772 493 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 TSPAN17Q96FV3 270 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 KLHL1Q9NR64 748 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 PCDHGB6Q9Y5F9 930 aa17.69■□□□□ 0.42
SF3A1-205ENST00000463818 GABRR3A8MPY1 467 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 A8MUA0 341 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 TAPBPO15533 448 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 PHGDHO43175 533 aaKnown RBP17.68■□□□□ 0.42
SF3A1-205ENST00000463818 RAD51CO43502 376 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 WISP3O95389 354 aaPredicted RBP17.68■□□□□ 0.42
SF3A1-205ENST00000463818 CCDC166P0CW27 439 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 MAOAP21397 527 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 STXBP1P61764 594 aaKnown RBP17.68■□□□□ 0.42
SF3A1-205ENST00000463818 BTN3A2P78410 334 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 OC90Q02509 493 aaPredicted RBP17.68■□□□□ 0.42
SF3A1-205ENST00000463818 TMIGD1Q6UXZ0 262 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 C3orf62Q6ZUJ4 267 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 CYS1Q717R9 158 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 RPS19BP1Q86WX3 136 aaKnown RBP17.68■□□□□ 0.42
SF3A1-205ENST00000463818 GPSM1Q86YR5 675 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 CA13Q8N1Q1 262 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 KIF2BQ8N4N8 673 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 CPNE1Q99829 537 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 CAPS2Q9BXY5 557 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 HES7Q9BYE0 225 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 NECTIN3Q9NQS3 549 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 PRDM9Q9NQV7 894 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 TXNDC16Q9P2K2 825 aa17.68■□□□□ 0.42
SF3A1-205ENST00000463818 DIDO1Q9BTC0 2240 aaKnown RBP17.68■□□□□ 0.42
SF3A1-205ENST00000463818 SCN2AQ99250 2005 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 TRGV8A0A0C4DH27 118 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 TCRBV16S1A1N1A0A5B0 115 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 CD46P15529 392 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 RUNX2Q13950 521 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 SLBPQ14493 270 aaKnown RBP eCLIP17.67■□□□□ 0.42
SF3A1-205ENST00000463818 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.67■□□□□ 0.42
SF3A1-205ENST00000463818 LGI4Q8N135 537 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 KRT78Q8N1N4 520 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 ARMC2Q8NEN0 867 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 TTLQ8NG68 377 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 CCT6BQ92526 530 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 ESAMQ96AP7 390 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 FAR2Q96K12 515 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 NT5DC2Q9H857 520 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 GRHL1Q9NZI5 618 aa17.67■□□□□ 0.42
SF3A1-205ENST00000463818 TEX15Q9BXT5 2789 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 IGKV3D-11A0A0A0MRZ8 115 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 A0A0G2JN53 185 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 TCRBV9S1A1TA0A576 114 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 LRIT2A6NDA9 550 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 FAM159BA6NKW6 160 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 CD1DP15813 335 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 STMN1P16949 149 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 EEF1DP29692 281 aaKnown RBP17.66■□□□□ 0.42
SF3A1-205ENST00000463818 GGT5P36269 586 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 GPX6P59796 221 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 ATP6V0D1P61421 351 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 C2orf54Q08AI8 447 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 FBXO48Q5FWF7 155 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 ZNF468Q5VIY5 522 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-205ENST00000463818 SLC25A25Q6KCM7 469 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 TCAIMQ8N3R3 496 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 HORMAD2Q8N7B1 307 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 NFAM1Q8NET5 270 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-205ENST00000463818 GAL3ST3Q96A11 431 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 MS4A6EQ96DS6 147 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 SCMH1Q96GD3 660 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 GPR22Q99680 433 aa17.66■□□□□ 0.42
SF3A1-205ENST00000463818 RBBP8Q99708 897 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms