RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 AHSPQ9NZD4 102 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-202ENST00000463060 SERTAD3Q9UJW9 196 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 ADAM29Q9UKF5 820 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 CEP250Q9BV73 2442 aa13.64□□□□□ -0.23
COL6A1-202ENST00000463060 TMEM150CB9EJG8 249 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 RTCAO00442 366 aaKnown RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ANKRD28O15084 1053 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 UBDO15205 165 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ERI3O43414 337 aaKnown RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 FOXS1O43638 330 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ZNF888P0CJ79 500 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 FGF5P12034 268 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 BCKDHAP12694 445 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 TACR1P25103 407 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ATP5A1P25705 553 aaKnown RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 CSTF2P33240 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 PLA2G16P53816 162 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 RPL38P63173 70 aaKnown RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 SIM1P81133 766 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 MC2RQ01718 297 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ACSM2AQ08AH3 577 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 MAD2L1Q13257 205 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 FAM53BQ14153 422 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 CCDC157Q569K6 752 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ACSM2BQ68CK6 577 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 MRM1Q6IN84 353 aaKnown RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 CLNKQ7Z7G1 428 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 BPHLQ86WA6 291 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ZNF655Q8N720 491 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 FNDC5Q8NAU1 212 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 OR8K5Q8NH50 307 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 LIN37Q96GY3 246 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 KCNC2Q96PR1 638 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 SORBS1Q9BX66 1292 aaKnown RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 NLNQ9BYT8 704 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 BRINP2Q9C0B6 783 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 ACTL8Q9H568 366 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 FBXO8Q9NRD0 319 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 SDR39U1Q9NRG7 319 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-202ENST00000463060 AIG1Q9NVV5 245 aa13.63□□□□□ -0.23
COL6A1-202ENST00000463060 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 A0A1W2PNU3 283 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 HYKKA2RU49 373 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 URADA6NGE7 173 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 B4E171 279 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 HYAL3O43820 417 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 OR2B3O76000 313 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 B3GALT4O96024 378 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 KLK1P06870 262 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 PRPS2P11908 318 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 CCL4P13236 92 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 ALOX12P18054 663 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 SDC1P18827 310 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 GPX3P22352 226 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 HIST1H1TP22492 207 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 TIA1P31483 386 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 TSPAN7P41732 249 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 ATP4BP51164 291 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 ITGA1P56199 1179 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 RAB8AP61006 207 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 GABPB1Q06547 395 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 IL11RAQ14626 422 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 GRM7Q14831 915 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 GSTA3Q16772 222 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 KIF26BQ2KJY2 2108 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 HES3Q5TGS1 186 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 TRIM40Q6P9F5 258 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 PRSS41Q7RTY9 318 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 MTDHQ86UE4 582 aaKnown RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 PDSS2Q86YH6 399 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 CACNA2D3Q8IZS8 1091 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 ZCCHC7Q8N3Z6 543 aaKnown RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 ACOT4Q8N9L9 421 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 OR6C1Q96RD1 312 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 C17orf62Q9BQA9 187 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 CENPKQ9BS16 269 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 C1orf50Q9BV19 199 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 NMUR2Q9GZQ4 415 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 KCMF1Q9P0J7 381 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 MCM8Q9UJA3 840 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 TRIM33Q9UPN9 1127 aa13.62□□□□□ -0.23
COL6A1-202ENST00000463060 POLR3HQ9Y535 204 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 COPG1Q9Y678 874 aaKnown RBP13.62□□□□□ -0.23
COL6A1-202ENST00000463060 A0A0G2JN53 185 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 EFCAB7A8K855 629 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 FCHO1O14526 889 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 TMPRSS11DO60235 418 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 GALR3O60755 368 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 DNAJB6O75190 326 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 KCNK5O95279 499 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 ANXA4P09525 319 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 G6PDP11413 515 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 IDO1P14902 403 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 PCSK2P16519 638 aa13.61□□□□□ -0.23
COL6A1-202ENST00000463060 ZFP36L2P47974 494 aaKnown RBP13.61□□□□□ -0.23
COL6A1-202ENST00000463060 NOVA1P51513 510 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms