RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-208	ENST00000461047	RARRES3	Q9UL19	164 aa		5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	SNX6	Q9UNH7	406 aa		5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	PLCL2	Q9UPR0	1127 aa		5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	KLK4	Q9Y5K2	254 aa		5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	AP1M2	Q9Y6Q5	423 aa		5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	PCDH15	Q96QU1	1955 aa		5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	MN1	Q10571	1320 aa	Predicted RBP	5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	TNRC6B	Q9UPQ9	1833 aa	Known RBP	5.69	□□□□□ -1.5
NUP98-208	ENST00000461047	KCNE1B	A0A087WTH5	132 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047		A0A088AWK7	358 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047		A0A1W2PPV9	198 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TRBC2	A0A5B9	178 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	WDR91	A4D1P6	747 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047		B4E171	279 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLCO1B7	G3V0H7	640 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	POLR1C	O15160	346 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZSCAN9	O15535	394 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	OR1F1	O43749	312 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	PRICKLE3	O43900	615 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ULK1	O75385	1050 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TOP3B	O95985	862 aa	Known RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SERPIND1	P05546	499 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLC35G6	P0C7Q6	338 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	MSL3P1	P0C860	447 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	THRA	P10827	490 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	PIM1	P11309	404 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	IMPDH2	P12268	514 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CDH1	P12830	882 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	HGF	P14210	728 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	MAG	P20916	626 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZNF10	P21506	573 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	PTX3	P26022	381 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	AHR	P35869	848 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TSPAN7	P41732	249 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	GRIA3	P42263	894 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CASP2	P42575	452 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SEPHS1	P49903	392 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	AGTR2	P50052	363 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ARSF	P54793	590 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	GFER	P55789	205 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ITGA1	P56199	1179 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	LINC00310	P59036	64 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	STXBP1	P61764	594 aa	Known RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZFP36L1	Q07352	338 aa	Known RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	GALNT1	Q10472	559 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	GRM7	Q14831	915 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	PCLAF	Q15004	111 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CHI3L2	Q15782	390 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TTMP	Q5BVD1	217 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	DCAF12	Q5T6F0	453 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	KIAA1614	Q5VZ46	1190 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TLDC1	Q6P9B6	456 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TMIGD1	Q6UXZ0	262 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CEACAM20	Q6UY09	585 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CDHR3	Q6ZTQ4	885 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	RAB11FIP2	Q7L804	512 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	DGLUCY	Q7Z3D6	616 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	GOLGA7	Q7Z5G4	137 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ARHGAP22	Q7Z5H3	698 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	MTERF4	Q7Z6M4	381 aa	Known RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TMPRSS11B	Q86T26	416 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLCO6A1	Q86UG4	719 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	FAM129C	Q86XR2	697 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLITRK4	Q8IW52	837 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CLYBL	Q8N0X4	340 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	D2HGDH	Q8N465	521 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	DCBLD1	Q8N8Z6	715 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TTC29	Q8NA56	475 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SRFBP1	Q8NEF9	429 aa	Known RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	OR4K1	Q8NGD4	311 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	METTL6	Q8TCB7	284 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TRPC4AP	Q8TEL6	797 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZNF483	Q8TF39	744 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	NEIL2	Q969S2	332 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ESAM	Q96AP7	390 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLC41A2	Q96JW4	573 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TRAPPC9	Q96Q05	1148 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZNF382	Q96SR6	550 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZFYVE21	Q9BQ24	234 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	TMEM79	Q9BSE2	394 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	NDC1	Q9BTX1	674 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLC29A3	Q9BZD2	475 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	B3GNT4	Q9C0J1	378 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ROGDI	Q9GZN7	287 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ELOVL6	Q9H5J4	265 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	ZNF552	Q9H707	407 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	NOL11	Q9H8H0	719 aa	Known RBP	5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	FBXO8	Q9NRD0	319 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	FGF21	Q9NSA1	209 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SLC39A1	Q9NY26	324 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	DLL3	Q9NYJ7	618 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	SEMA5B	Q9P283	1151 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	PCTP	Q9UKL6	214 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	EMCN	Q9ULC0	261 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	CDC14A	Q9UNH5	594 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	BTRC	Q9Y297	605 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	MYLK	Q15746	1914 aa		5.68	□□□□□ -1.5
NUP98-208	ENST00000461047	MUC6	Q6W4X9	2439 aa		5.67	□□□□□ -1.5
NUP98-208	ENST00000461047	CACNA1E	Q15878	2313 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms