RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 NPIPB15A6NHN6 443 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 HMGB1P1B2RPK0 211 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 GPR89AB7ZAQ6 455 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 DIRC3C9JPN6 131 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 RAB27BO00194 218 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PDXKO00764 312 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TRAFD1O14545 582 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PIP5K1BO14986 540 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 ZSCAN9O15535 394 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SUN1O94901 812 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 AGR2O95994 175 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 STATHP02808 62 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 GPR89BP0CG08 455 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PECAM1P16284 738 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 ZNF7P17097 686 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TPH1P17752 444 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 VCLP18206 1134 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TNFAIP3P21580 790 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PPIFP30405 207 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PTGER1P34995 402 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 LMAN1P49257 510 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SULT1E1P49888 294 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 DRG2P55039 364 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 YBEYP58557 167 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TBX2Q13207 712 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PDCLQ13371 301 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TNK1Q13470 666 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 MEA1Q16626 185 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SLC5A12Q1EHB4 618 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 FAM174BQ3ZCQ3 159 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 GPRC6AQ5T6X5 926 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TXNRD3NBQ6F5E7 133 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 OGFOD2Q6N063 350 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SHC4Q6S5L8 630 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 NEK10Q6ZWH5 1172 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 NDUFAF7Q7L592 441 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SLC26A9Q7LBE3 791 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 MOGAT3Q86VF5 341 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 NLRP14Q86W24 1093 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SLC13A5Q86YT5 568 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 LIX1Q8N485 282 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 FAM109AQ8N4B1 249 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PDILTQ8N807 584 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 C3orf56Q8N813 242 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 NAXEQ8NCW5 288 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 MAPK1IP1LQ8NDC0 245 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SMPDL3BQ92485 455 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TRIM63Q969Q1 353 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 ZBED6CLQ96FA7 236 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PGAP3Q96FM1 320 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 MARS2Q96GW9 593 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 MPP4Q96JB8 637 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 ZNF396Q96N95 335 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TRIB1Q96RU8 372 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 NPY6RQ99463 290 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 TIMM29Q9BSF4 260 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 RIOK2Q9BVS4 552 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SSBP3Q9BWW4 388 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PANK2Q9BZ23 570 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 SLC26A1Q9H2B4 701 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 IRAK4Q9NWZ3 460 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PPP4R1LQ9P1A2 415 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 OR12D3Q9UGF7 316 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 POMT2Q9UKY4 750 aa3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 MTO1Q9Y2Z2 717 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.78□□□□□ -1.8
ECHDC1-211ENST00000460558 PRKDCP78527 4128 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 A0A1W2PS29 197 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 MARCH11A6NNE9 402 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 EIF3CLB5ME19 914 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 H3BQV1 296 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 EIF3FO00303 357 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 RASGRF2O14827 1237 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 TFECO14948 347 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 KMOO15229 486 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 MED7O43513 233 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 CALUO43852 315 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 CDC40O60508 579 aaKnown RBP eCLIP3.77□□□□□ -1.811e-6■□□□□ 9.9
ECHDC1-211ENST00000460558 SOCS5O75159 536 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 PALMO75781 387 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 CALCAP01258 141 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 ICAM2P13598 275 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 ST6GAL1P15907 406 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF8P17098 575 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 SRD5A1P18405 259 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 UGT1A1P22309 533 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 NR2F2P24468 414 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 CXCR2P25025 360 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 MSX2P35548 267 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 PSMC2P35998 433 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 RGRP47804 291 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 PTH2RP49190 550 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 ASCL1P50553 236 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 ARSEP51690 589 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 SNX16P57768 344 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 AP1S1P61966 158 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 TIAL1Q01085 375 aaKnown RBP eCLIP3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF844Q08AG5 666 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 LRMPQ12912 555 aa3.77□□□□□ -1.81
ECHDC1-211ENST00000460558 VEZF1Q14119 521 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms