RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CYP4X1Q8N118 509 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 AGAP11Q8TF27 550 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 C14orf79Q96F83 325 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 PDLIM5Q96HC4 596 aaKnown RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 MS4A14Q96JA4 679 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 OR4K3Q96R72 315 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 PRDM9Q9NQV7 894 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 PPP2R2CQ9Y2T4 447 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 KLF13Q9Y2Y9 288 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 GOLGA6L10A0A0M3HER8 536 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 TCRBV16S1A1N1A0A5B0 115 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 KLRC4-KLRK1H3BQV0 150 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 UTP15Q8TED0 518 aaKnown RBP20.16■□□□□ 0.82
CPNE1-220ENST00000458038 SLC5A11Q8WWX8 675 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 NEIL2Q969S2 332 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 AIF1LQ9BQI0 150 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 DEFB126Q9BYW3 111 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 PELI2Q9HAT8 420 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 VWA7Q9Y334 891 aa20.16■□□□□ 0.82
CPNE1-220ENST00000458038 IGKV3D-11A0A0A0MRZ8 115 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 PPP1R7Q15435 360 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 TERF2Q15554 542 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 ZNF468Q5VIY5 522 aaPredicted RBP20.15■□□□□ 0.82
CPNE1-220ENST00000458038 FAM45BPQ6NSW5 357 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 KIF2BQ8N4N8 673 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 FAM45AQ8TCE6 357 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 ACTRT1Q8TDG2 376 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 ANKRD7Q92527 254 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 CERS2Q96G23 380 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 DMRTA2Q96SC8 542 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 SLC6A16Q9GZN6 736 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 COQ3Q9NZJ6 369 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 DYRK1BQ9Y463 629 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 KCNE2Q9Y6J6 123 aa20.15■□□□□ 0.82
CPNE1-220ENST00000458038 SERPINA6P08185 405 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 SMIM10L1P0DMW3 83 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 ST13P50502 369 aaKnown RBP20.14■□□□□ 0.81
CPNE1-220ENST00000458038 OLR1P78380 273 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 BTG2P78543 158 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 REEP5Q00765 189 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 CATSPEREQ5SY80 951 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 CHERPQ8IWX8 916 aaKnown RBP20.14■□□□□ 0.81
CPNE1-220ENST00000458038 CPSF7Q8N684 471 aaKnown RBP20.14■□□□□ 0.81
CPNE1-220ENST00000458038 NFAM1Q8NET5 270 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-220ENST00000458038 CA5BP1Q8WTZ4 195 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 SMIM10Q96HG1 83 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 ENKD1Q9H0I2 346 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 MMACHCQ9Y4U1 282 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 ASB1Q9Y576 335 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 SETD2Q9BYW2 2564 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-220ENST00000458038 MED13LQ71F56 2210 aa20.14■□□□□ 0.81
CPNE1-220ENST00000458038 DNAJC13O75165 2243 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 INTS1Q8N201 2190 aaKnown RBP20.13■□□□□ 0.81
CPNE1-220ENST00000458038 SYNDIG1LA6NDD5 238 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 DNALI1O14645 258 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-220ENST00000458038 DNAJB6O75190 326 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 GUCA1CO95843 209 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 KIR3DL1P43629 444 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 CLCN2P51788 898 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 ITGA8P53708 1063 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 BBS9Q3SYG4 887 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 RNFT1Q5M7Z0 435 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 TEDDM1Q5T9Z0 273 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 HECTD2Q5U5R9 776 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 NXPE4Q6UWF7 544 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 ZNF227Q86WZ6 799 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 CEP97Q8IW35 865 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 ACBD4Q8NC06 268 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 CHTF18Q8WVB6 975 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 PPANQ9NQ55 473 aaKnown RBP20.13■□□□□ 0.81
CPNE1-220ENST00000458038 ZFATQ9P243 1243 aa20.13■□□□□ 0.81
CPNE1-220ENST00000458038 C19orf84I3L1E1 186 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 ADAM10O14672 748 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 TFECO14948 347 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-220ENST00000458038 MAOAP21397 527 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 PTGS2P35354 604 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 STXBP1P61764 594 aaKnown RBP20.12■□□□□ 0.81
CPNE1-220ENST00000458038 CDSNQ15517 529 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 TMEM211Q6ICI0 200 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 THOC6Q86W42 341 aaKnown RBP20.12■□□□□ 0.81
CPNE1-220ENST00000458038 TMEM156Q8N614 296 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 ANKRD53Q8N9V6 530 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 B3GNT7Q8NFL0 401 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 TTLQ8NG68 377 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 C16orf52Q8NHV5 167 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 FAM57AQ8TBR7 257 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 ASIC3Q9UHC3 531 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 PPT2Q9UMR5 302 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 SPG11Q96JI7 2443 aa20.12■□□□□ 0.81
CPNE1-220ENST00000458038 ZNF407Q9C0G0 2248 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 CES2O00748 559 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 B3GALT4O96024 378 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 GSTM2P28161 218 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 HNMTP50135 292 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 MEOX1P50221 254 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 RAB8AP61006 207 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 CCZ1BP86790 482 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 CCZ1P86791 482 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-220ENST00000458038 CDKL1Q00532 357 aa20.11■□□□□ 0.81
CPNE1-220ENST00000458038 HYAL2Q12891 473 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms