RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 TUBB3Q13509 450 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 PTPRRQ15256 657 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 SNAP47Q5SQN1 464 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 HMBOX1Q6NT76 420 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 RTL4Q6ZR62 310 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 CYP4V2Q6ZWL3 525 aaPredicted RBP13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 TMEM126BQ8IUX1 230 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 SLC22A15Q8IZD6 547 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ANKFN1Q8N957 763 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 GALNT6Q8NCL4 622 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 OR13J1Q8NGT2 312 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MOSPD2Q8NHP6 518 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 PMM1Q92871 262 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MAL2Q969L2 176 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MYRFLQ96LU7 910 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 C12orf66Q96MD2 445 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 SLC2A13Q96QE2 648 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MMP28Q9H239 520 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ABCG2Q9UNQ0 655 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 SCML2Q9UQR0 700 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 WNT6Q9Y6F9 365 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ZNF780BQ9Y6R6 833 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ANKRD66B4E2M5 251 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 PSMD9O00233 223 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ADAM12O43184 909 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ZNF623O75123 536 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 RASGRP1O95267 797 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 CAPNS1P04632 268 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 HIST1H2ABP04908 130 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MYF6P23409 242 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 KDELR2P33947 212 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 APLP1P51693 650 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 EMX2Q04743 252 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 CBLBQ13191 982 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 GNA13Q14344 377 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 FGFBP1Q14512 234 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 TAF1AQ15573 450 aaPredicted RBP13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 LRRC66Q68CR7 880 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 TUBA3EQ6PEY2 450 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 HIST3H2AQ7L7L0 130 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 RNASE11Q8TAA1 199 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ARNTL2Q8WYA1 636 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 HIST1H2ACQ93077 130 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 A0A1B0GVC2 190 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 A6NIN4 97 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 GLOD5A6NK44 160 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MAFKO60675 156 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 BMP2P12643 396 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 MAPK8P45983 427 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ABRAXAS2Q15018 415 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 OR4D1Q15615 310 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 CEACAM20Q6UY09 585 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 DPY19L3Q6ZPD9 716 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 SORCS1Q8WY21 1168 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 CXXC1Q9P0U4 656 aaPredicted RBP13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 GJD2Q9UKL4 321 aa13.04□□□□□ -0.32
KCNMA1-216ENST00000457953 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 RPN2P04844 631 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 LAG3P18627 525 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 NSG1P42857 185 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 EIF2B5Q13144 721 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 CAMK1Q14012 370 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SUSD1Q6UWL2 747 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 ZNF438Q7Z4V0 828 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 ISCA2Q86U28 154 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SH3YL1Q96HL8 342 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 IFT27Q9BW83 186 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 HDHD5Q9BXW7 423 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 FAM124BQ9H5Z6 455 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SH3D21A4FU49 640 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 H0YAE9 185 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 ZNF432O94892 652 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 PPM1AP35813 382 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 RNF144AP50876 292 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 NPRL3Q12980 569 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SLBPQ14493 270 aaKnown RBP eCLIP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SPATC1Q76KD6 591 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 MRGPRX2Q96LB1 330 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 ERMAPQ96PL5 475 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SLC30A3Q99726 388 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 DPCDQ9BVM2 203 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 BRD7Q9NPI1 651 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SEC16AO15027 2179 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 A0A096LPI6 279 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 PLD2O14939 933 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 CHST10O43529 356 aa13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 RPP14O95059 124 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-216ENST00000457953 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms