RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PCLAFQ15004 111 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 LAPTM4AQ15012 233 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 HERC3Q15034 1050 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 NCF4Q15080 339 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 NKG7Q16617 165 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 CPSF6Q16630 551 aaKnown RBP eCLIP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 GGTA1PQ4G0N0 100 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 FAM69BQ5VUD6 431 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 LIPMQ5VYY2 423 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 LETMD1Q6P1Q0 360 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 HDXQ7Z353 690 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 C10orf107Q8IVU9 208 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 RNF175Q8N4F7 328 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 ENDOVQ8N8Q3 282 aaKnown RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 CCDC63Q8NA47 563 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 OR4F6Q8NGB9 312 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 HUS1BQ8NHY5 278 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 PPP4R1Q8TF05 950 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 COL26A1Q96A83 441 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 FKBP10Q96AY3 582 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 TLCD1Q96CP7 247 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 MS4A6EQ96DS6 147 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 MMABQ96EY8 250 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 C17orf62Q9BQA9 187 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 IQCGQ9H095 443 aaKnown RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 GSTO2Q9H4Y5 243 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 ACTL8Q9H568 366 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 ARGLU1Q9NWB6 273 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 PSD3Q9NYI0 1048 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 ADGRE2Q9UHX3 823 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 TCFL5Q9UL49 500 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 GCN1Q92616 2671 aaKnown RBP9.52□□□□□ -0.88
ATG4A-206ENST00000457035 URADA6NGE7 173 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ZNF891A8MT65 544 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 C9J4A7 227 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 SGK494L7N484 410 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 UBFD1O14562 309 aaKnown RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ATXN7O15265 892 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 PRPF4O43172 522 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 GALR3O60755 368 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 TRIM13O60858 407 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 KLHL18O94889 574 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 MLYCDO95822 493 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 OTCP00480 354 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 TGFB1P01137 390 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ZNF888P0CJ79 500 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 SERPINB1P30740 379 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ALDH3A1P30838 453 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 PIK3CBP42338 1070 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 AVPR1BP47901 424 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 NEK2P51955 445 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 FOXL2P58012 376 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 RAB8AP61006 207 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 NAA20P61599 178 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 STXBP1P61764 594 aaKnown RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ZRSR2Q15696 482 aaKnown RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 RBBP7Q16576 425 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 SYT16Q17RD7 645 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 DEFB134Q4QY38 66 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 VWA2Q5GFL6 755 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 TOR1AIP1Q5JTV8 583 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 DEPDC1Q5TB30 811 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ARHGAP40Q5TG30 622 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 FAM219BQ5XKK7 198 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ABHD13Q7L211 337 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 UBE3DQ7Z6J8 389 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 SYVN1Q86TM6 617 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 MYLK4Q86YV6 388 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 CCNYL1Q8N7R7 359 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 OR6Y1Q8NGX8 325 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ZCCHC10Q8TBK6 192 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 STT3BQ8TCJ2 826 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 STARD8Q92502 1023 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 CCT6BQ92526 530 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ARL8AQ96BM9 186 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 F2RL3Q96RI0 385 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ZNF382Q96SR6 550 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 MTERF1Q99551 399 aaKnown RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 GATA5Q9BWX5 397 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 MS4A8Q9BY19 250 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 REXO4Q9GZR2 422 aaKnown RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 VIPAS39Q9H9C1 493 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 ANKHQ9HCJ1 492 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 PRDM7Q9NQW5 492 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 CTSFQ9UBX1 484 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 GPN3Q9UHW5 284 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-206ENST00000457035 MID2Q9UJV3 735 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 PPT2Q9UMR5 302 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 NAALAD2Q9Y3Q0 740 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 MAP4K5Q9Y4K4 846 aa9.52□□□□□ -0.89
ATG4A-206ENST00000457035 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
ATG4A-206ENST00000457035 BSNQ9UPA5 3926 aa9.51□□□□□ -0.89
ATG4A-206ENST00000457035 MAGEB17A8MXT2 336 aa9.51□□□□□ -0.89
ATG4A-206ENST00000457035 FOXE1O00358 373 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-206ENST00000457035 FFAR3O14843 346 aa9.51□□□□□ -0.89
ATG4A-206ENST00000457035 TM9SF1O15321 606 aa9.51□□□□□ -0.89
ATG4A-206ENST00000457035 GPR42O15529 346 aa9.51□□□□□ -0.89
ATG4A-206ENST00000457035 C1QL1O75973 258 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms