RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 COPS7BQ9H9Q2 264 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 SLAMF7Q9NQ25 335 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 RIC8BQ9NVN3 520 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ZNF490Q9ULM2 529 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ASB1Q9Y576 335 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 IGHV1-45A0A0A0MS14 117 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 A0A0G2JN53 185 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 LRIT2A6NDA9 550 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 B4GALT2O60909 372 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 FHP07954 510 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 CYC1P08574 325 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 COX6A1P12074 109 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 RNH1P13489 461 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 CASP2P42575 452 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 MAGEA12P43365 314 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 PIK3CGP48736 1102 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 PLA2G16P53816 162 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 HYAL2Q12891 473 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 GTF2H2Q13888 395 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 NSDHLQ15738 373 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 NADK2Q4G0N4 442 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 GTF2H2CQ6P1K8 395 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 TMEM205Q6UW68 189 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 CPEB2Q7Z5Q1 589 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 CNPY4Q8N129 248 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 PTGR2Q8N8N7 351 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 PHF21BQ96EK2 531 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 MESP1Q9BRJ9 268 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 ZNF700Q9H0M5 742 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 ACTR8Q9H981 624 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 PSMC3IPQ9P2W1 217 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 COPG2Q9UBF2 871 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
PDLIM2-215ENST00000456545 OR2W5A6NFC9 320 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 B3GALT2O43825 422 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 PRAMEF4O60810 478 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 SMIM10L1P0DMW3 83 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 EPORP19235 508 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 PCBP2Q15366 365 aaKnown RBP eCLIP17.05■□□□□ 0.329e-7■■■■□ 24.1
PDLIM2-215ENST00000456545 PRAMEF9Q5VWM5 478 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 CHSY3Q70JA7 882 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 SRFBP1Q8NEF9 429 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.05■□□□□ 0.324e-7■■■■■ 58.1
PDLIM2-215ENST00000456545 MS4A6EQ96DS6 147 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 SMIM10Q96HG1 83 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 MRPL57Q9BQC6 102 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 TUBB6Q9BUF5 446 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 TXLNGYQ9BZA5 131 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 EPN3Q9H201 632 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 EPS8L2Q9H6S3 715 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 IPPKQ9H8X2 491 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 XPR1Q9UBH6 696 aa17.05■□□□□ 0.32
PDLIM2-215ENST00000456545 LOC102723996A0A087X1L8 192 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 PYCARD-AS1I3L0S3 204 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 KALRNO60229 2985 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 KLK8O60259 260 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 ZNF500O60304 480 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 PRMT3O60678 531 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 DNAJB6O75190 326 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 MYBL2P10244 700 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 CD22P20273 847 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 TAC1P20366 129 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 EEF1DP29692 281 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 SERPINB1P30740 379 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 PHEXP78562 749 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 DDX39BQ13838 428 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 ABRAXAS2Q15018 415 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 LIPJQ5W064 366 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 TIFABQ6ZNK6 161 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 LANCL3Q6ZV70 420 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 ANKRD37Q7Z713 158 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 PLPP5Q8NEB5 264 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 ARMC2Q8NEN0 867 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 OR2L5Q8NG80 312 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 REPS1Q96D71 796 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 MAGEB10Q96LZ2 347 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 PTCHD1Q96NR3 888 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 F2RL3Q96RI0 385 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 CENPKQ9BS16 269 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 NPLQ9BXD5 320 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 MAP10Q9P2G4 905 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 FETUBQ9UGM5 382 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 ADGRE2Q9UHX3 823 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 SCN2AQ99250 2005 aa17.04■□□□□ 0.32
PDLIM2-215ENST00000456545 IGHV3-20A0A0C4DH32 117 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 LRRC14BA6NHZ5 514 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SH3BGRLO75368 114 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SEC24DO94855 1032 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SIX3O95343 332 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SLU7O95391 586 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 TGFB1P01137 390 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 SERPINA7P05543 415 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 PRR35P0CG20 571 aa17.03■□□□□ 0.32
PDLIM2-215ENST00000456545 GCAP28676 217 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms