RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 ZNF552Q9H707 407 aaPredicted RBP16.38■□□□□ 0.21
USP39-208ENST00000455732 PPCSQ9HAB8 311 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 ZNF358Q9NW07 568 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 LRIT2A6NDA9 550 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 ZNF860A6NHJ4 632 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 ESPNB1AK53 854 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 DPM1O60762 260 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 TBX6O95947 436 aaPredicted RBP16.37■□□□□ 0.21
USP39-208ENST00000455732 HPP00738 406 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 COX6A1P12074 109 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 PIK3CGP48736 1102 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 EFNA3P52797 238 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 MLLT10P55197 1068 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 IGFBP7Q16270 282 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 VWA5B1Q5TIE3 1220 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 VN1R5Q7Z5H4 357 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 RBMXL3Q8N7X1 1067 aaKnown RBP16.37■□□□□ 0.21
USP39-208ENST00000455732 MRPL57Q9BQC6 102 aaKnown RBP16.37■□□□□ 0.21
USP39-208ENST00000455732 MESP1Q9BRJ9 268 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 VN1R1Q9GZP7 353 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 MRPL46Q9H2W6 279 aaKnown RBP16.37■□□□□ 0.21
USP39-208ENST00000455732 C5AR2Q9P296 337 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 CPSF2Q9P2I0 782 aaKnown RBP16.37■□□□□ 0.21
USP39-208ENST00000455732 MKL2Q9ULH7 1088 aa16.37■□□□□ 0.21
USP39-208ENST00000455732 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
USP39-208ENST00000455732 ANKDD1BA6NHY2 528 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 C4orf51C9J302 202 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 STX16-NPEPL1H3BU86 382 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 STX16O14662 325 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 UGDHO60701 494 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 ALOX12BO75342 701 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 JRKO75564 520 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 SORBS2O94875 1100 aaKnown RBP16.36■□□□□ 0.21
USP39-208ENST00000455732 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
USP39-208ENST00000455732 SERPINB1P30740 379 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 HNRNPH1P31943 449 aaKnown RBP16.36■□□□□ 0.21
USP39-208ENST00000455732 HIST2H2ACQ16777 129 aaPredicted RBP16.36■□□□□ 0.21
USP39-208ENST00000455732 TOR1AIP1Q5JTV8 583 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 HIST2H2AA3Q6FI13 130 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 NDUFAF7Q7L592 441 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 LAS2Q8IYD9 372 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 SHISA5Q8N114 240 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 TEX9Q8N6V9 391 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 OR5T3Q8NGG3 340 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 ACMSDQ8TDX5 336 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 MIB2Q96AX9 1013 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 C8orf44Q96CB5 159 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 MS4A6EQ96DS6 147 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 KLHL31Q9H511 634 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 LANCL2Q9NS86 450 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 ANGPTL3Q9Y5C1 460 aa16.36■□□□□ 0.21
USP39-208ENST00000455732 NAV2Q8IVL1 2488 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 IGHV1-45A0A0A0MS14 117 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 E2F3O00716 465 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 SMIM24O75264 130 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 B3GALT4O96024 378 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 ALPPP05187 535 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 FHP07954 510 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 C8orf89P0DMQ9 161 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 HNF4AP41235 474 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 CD97P48960 835 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 RAB8AP61006 207 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 VSNL1P62760 191 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 GTF2H2Q13888 395 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 RASA2Q15283 850 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 MINDY4Q4G0A6 757 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 LIPJQ5W064 366 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 ADNP2Q6IQ32 1131 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 GRHL2Q6ISB3 625 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 JMJD6Q6NYC1 403 aaPredicted RBP16.35■□□□□ 0.21
USP39-208ENST00000455732 GTF2H2CQ6P1K8 395 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 MED27Q6P2C8 311 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 IGFL3Q6UXB1 125 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 TDRPQ86YL5 185 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 TMEM151AQ8N4L1 468 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 PTGR2Q8N8N7 351 aaPredicted RBP16.35■□□□□ 0.21
USP39-208ENST00000455732 Q8NA96 180 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 OR2L5Q8NG80 312 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 UBLCP1Q8WVY7 318 aaPredicted RBP16.35■□□□□ 0.21
USP39-208ENST00000455732 METTL21AQ8WXB1 218 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 CCT6BQ92526 530 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 TBC1D20Q96BZ9 403 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 PEX11GQ96HA9 241 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 SCYL1Q96KG9 808 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
USP39-208ENST00000455732 ZNF700Q9H0M5 742 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 RIC8BQ9NVN3 520 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 PLAAQ9Y263 795 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 TSC22D4Q9Y3Q8 395 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 DOPEY2Q9Y3R5 2298 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 LRRK2Q5S007 2527 aa16.35■□□□□ 0.21
USP39-208ENST00000455732 ESPL1Q14674 2120 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 CPAMD8Q8IZJ3 1885 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 A0A088AWK7 358 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 NSG1A0A0A6YYJ2 146 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 ERI3O43414 337 aaKnown RBP16.34■□□□□ 0.21
USP39-208ENST00000455732 CHST10O43529 356 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 SIX3O95343 332 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms