RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CABS1Q96KC9 395 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 C10orf90Q96M02 699 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CCDC138Q96M89 665 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FOPNLQ96NB1 174 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PRAP1Q96NZ9 151 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 OR2A5Q96R48 311 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CRB3Q9BUF7 120 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FRMD8P1Q9BZ68 369 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 TSGA10Q9BZW7 698 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 LHPPQ9H008 270 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 SLC26A1Q9H2B4 701 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 WDR54Q9H977 334 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 EIF2B3Q9NR50 452 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FBXO6Q9NRD1 293 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 AGPAT4Q9NRZ5 378 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 MBNL3Q9NUK0 354 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 TRPC4Q9UBN4 977 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF282Q9UDV7 671 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 TAC3Q9UHF0 121 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 GPR160Q9UJ42 338 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 MRPS2Q9Y399 296 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FLNCQ14315 2725 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 MAST4O15021 2626 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 NINQ8N4C6 2090 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 UBR5O95071 2799 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CACNA1CQ13936 2221 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF407Q9C0G0 2248 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 NSG1A0A0A6YYJ2 146 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 SCO2A0A1W2PP80 73 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 FEZF1A0PJY2 475 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 OR2A25A4D2G3 310 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 NOTOA8MTQ0 251 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 A8MUI8 341 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 IDSB3KWA1 339 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 C22orf46C9J442 243 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 E7ENX8 843 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MAP2K7O14733 419 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 P2RX6O15547 441 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNHIT1O43257 154 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 FOXS1O43638 330 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 LCMT2O60294 686 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 KLHL41O60662 606 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ZG16O60844 167 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 DNAJB6O75190 326 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PSIP1O75475 530 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 USP1O94782 785 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 WDPCPO95876 746 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 HPP00738 406 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 HEXBP07686 556 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PRR35P0CG20 571 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ERVK-10P10266 1014 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ITGAMP11215 1152 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 COX6A1P12074 109 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 KRT15P19012 456 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 TPSB2P20231 275 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 FBLP22087 321 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 CXCR2P25025 360 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 SLC26A3P40879 764 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 KIR2DL2P43627 348 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 CARSP49589 748 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PNLIPRP1P54315 467 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 KCNK10P57789 538 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ARG2P78540 354 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MPP1Q00013 466 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MVKQ03426 396 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 TAP2Q03519 686 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PRDX1Q06830 199 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MFAP5Q13361 173 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 THOC5Q13769 683 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 GBX1Q14549 363 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 TPSAB1Q15661 275 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 TYSND1Q2T9J0 566 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MUM1Q2TAK8 710 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PRTGQ2VWP7 1150 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 THEMIS2Q5TEJ8 643 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ICE2Q659A1 982 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 FCRLBQ6BAA4 426 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 SP5Q6BEB4 398 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MRNIPQ6NTE8 343 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PRMT9Q6P2P2 845 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 TTC27Q6P3X3 843 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF549Q6P9A3 640 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 DRICH1Q6PGQ1 229 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 MBOAT1Q6ZNC8 495 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 LHFPL2Q6ZUX7 228 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 UBE2R2Q712K3 238 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PRSS41Q7RTY9 318 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PIWIL4Q7Z3Z4 852 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ADCK2Q7Z695 626 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 PAQR7Q86WK9 346 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 LRRC6Q86X45 466 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 CILP2Q8IUL8 1156 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 LRRC8AQ8IWT6 810 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 KBTBD2Q8IY47 623 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 LRRC56Q8IYG6 542 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 CSNK1A1LQ8N752 337 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 ST6GALNAC3Q8NDV1 305 aa4.44□□□□□ -1.7
GTF3C3-208ENST00000455546 OR9A4Q8NGU2 314 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms