RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 UAP1Q16222 522 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-207ENST00000453796 ADPRMQ3LIE5 342 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 MFSD4BQ5TF39 518 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 IRAK1BP1Q5VVH5 260 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 ADNP2Q6IQ32 1131 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 ISLR2Q6UXK2 745 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 BRIX1Q8TDN6 353 aaKnown RBP13.72□□□□□ -0.21
HSPG2-207ENST00000453796 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 GAL3ST3Q96A11 431 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 TBC1D20Q96BZ9 403 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 MS4A6EQ96DS6 147 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 EPS8L2Q9H6S3 715 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 PCDHGA10Q9Y5H3 936 aa13.72□□□□□ -0.21
HSPG2-207ENST00000453796 ASH1LQ9NR48 2969 aaKnown RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 FLNCQ14315 2725 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 PRRC2CQ9Y520 2896 aaKnown RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 A0A096LPK6 155 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 IGHV3-20A0A0C4DH32 117 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 MAGEB17A8MXT2 336 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SUPT3HB4E1H0 165 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 K7EPI3 171 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 KLK8O60259 260 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SUPT3HO75486 399 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 CLEC3AO75596 197 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 CDC123O75794 336 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 WFS1O76024 890 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SEC24DO94855 1032 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 S100BP04271 92 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 TYK2P29597 1187 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 HNF4AP41235 474 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SERPINB8P50452 374 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 CHIT1Q13231 466 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 ACAP2Q15057 778 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 FAM83EQ2M2I3 478 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 XKR6Q5GH73 641 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 PLAG1Q6DJT9 500 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 CA13Q8N1Q1 262 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 PLD6Q8N2A8 252 aaKnown RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SIRT6Q8N6T7 355 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 GALNT11Q8NCW6 608 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 TSLPQ969D9 159 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 SNRNP40Q96DI7 357 aaKnown RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 QRFPRQ96P65 431 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 PAFAH2Q99487 392 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 EFCAB11Q9BUY7 163 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 RHBGQ9H310 441 aa13.71□□□□□ -0.21
HSPG2-207ENST00000453796 C19orf25Q9UFG5 118 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-207ENST00000453796 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 ANKDD1BA6NHY2 528 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 SYCE1LA8MT33 242 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 INHBAP08476 426 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 ICAM2P13598 275 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 UQCRFS1P47985 274 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 GLRBP48167 497 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 SERPINB9P50453 376 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 RUNX2Q13950 521 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 NAA30Q147X3 362 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-207ENST00000453796 ABRAXAS2Q15018 415 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 TECRLQ5HYJ1 363 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 B3GNTL1Q67FW5 361 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-207ENST00000453796 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 QSOX2Q6ZRP7 698 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 LINC00696Q6ZRV3 163 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 ATCAYQ86WG3 371 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 C19orf60Q96EN9 201 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 ILKAPQ9H0C8 392 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-207ENST00000453796 PTGFRNQ9P2B2 879 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 OPTCQ9UBM4 332 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 ZNF180Q9UJW8 692 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 NTNG1Q9Y2I2 539 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 DOPEY2Q9Y3R5 2298 aa13.7□□□□□ -0.22
HSPG2-207ENST00000453796 A0A087WUV0 522 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 IGKV3D-11A0A0A0MRZ8 115 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 A0A0G2JN53 185 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 ERI3O43414 337 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 RNH1P13489 461 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 JAK1P23458 1154 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 GCAP28676 217 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 TSFMP43897 325 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 AP2B1P63010 937 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 BTN3A2P78410 334 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 BTG2P78543 158 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 IRF8Q02556 426 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 LAPTM5Q13571 262 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 NSDHLQ15738 373 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 PAPD4Q6PIY7 484 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 LAS2Q8IYD9 372 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms