RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 COMTP21964 271 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 CETN2P41208 172 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 SSR4P51571 173 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 ZNF136P52737 540 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 NR1H2P55055 460 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 SIX1Q15475 284 aaPredicted RBP11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 ODF2Q5BJF6 829 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 ZNF425Q6IV72 752 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 C20orf204Q6ZNR8 217 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 GSDMBQ8TAX9 411 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 PEX11GQ96HA9 241 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 C16orf45Q96MC5 204 aaPredicted RBP11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 OR1F2PQ96R84 312 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 FAM173AQ9BQD7 235 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 TSSK1BQ9BXA7 367 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 LANCL2Q9NS86 450 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 HPF1Q9NWY4 346 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 TRMT1Q9NXH9 659 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 NDRG3Q9UGV2 375 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 FBXW2Q9UKT8 454 aa11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 YARS2Q9Y2Z4 477 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-204ENST00000449537 A0A0G2JMM0 328 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 A0A1W2PPB8 328 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 A0A1W2PRS3 328 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 KRT87PA6NCN2 255 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 A8MV72 311 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 KIR3DP1A8MWS1 328 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 G3V3Y1 287 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 OR1I1O60431 355 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 RPA3P35244 121 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 BDKRB1P46663 353 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 CLCN2P51788 898 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 AGFG1P52594 562 aaKnown RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 COPS2P61201 443 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 PRDX1Q06830 199 aaKnown RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 SUSD1Q6UWL2 747 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 GPALPP1Q8IXQ4 340 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 KATNAL2Q8IYT4 538 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 MAGEC3Q8TD91 643 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 SKA2Q8WVK7 121 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 CARD6Q9BX69 1037 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 RBCK1Q9BYM8 510 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 ANKHQ9HCJ1 492 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 SPATA7Q9P0W8 599 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 AAR2Q9Y312 384 aaKnown RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.65□□□□□ -0.54
AC004540.1-204ENST00000449537 USF3Q68DE3 2245 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 TRBV11-1A0A0K0K1C0 115 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 SAGE2PA6NJ88 616 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 RDH16O75452 317 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 ZNF189O75820 626 aaPredicted RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 SOX30O94993 753 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 TNNT1P13805 278 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 CTSSP25774 331 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 PTPN7P35236 360 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 OPRM1P35372 400 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 CCNFP41002 786 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 WNT3P56703 355 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 RWDD2BP57060 319 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 ETF1P62495 437 aaKnown RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 TSTA3Q13630 321 aaPredicted RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 PRPSAP1Q14558 356 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 HYAL4Q2M3T9 481 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 WIPI1Q5MNZ9 446 aaPredicted RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 BHLHB9Q6PI77 547 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 IL20RBQ6UXL0 311 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 ABHD13Q7L211 337 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 ADCK2Q7Z695 626 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 PLD3Q8IV08 490 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 LACC1Q8IV20 430 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 C17orf53Q8N3J3 647 aaPredicted RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 KIF18AQ8NI77 898 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 STYXQ8WUJ0 223 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 ASB15Q8WXK1 588 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 SMPDL3AQ92484 453 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 HES6Q96HZ4 224 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 TTC1Q99614 292 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 RBM24Q9BX46 236 aaKnown RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 REG4Q9BYZ8 158 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 GBA3Q9H227 469 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 JKAMPQ9P055 326 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 C6orf203Q9P0P8 240 aaPredicted RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 FEZ2Q9UHY8 353 aaPredicted RBP11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 TFR2Q9UP52 801 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 EFR3BQ9Y2G0 817 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 NFS1Q9Y697 457 aa11.64□□□□□ -0.55
AC004540.1-204ENST00000449537 EML6Q6ZMW3 1958 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 KIAA1549Q9HCM3 1950 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 IQCF5A8MTL0 148 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 A8MUA0 341 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 CCNDBP1O95273 360 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 FHP07954 510 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 PAX1P15863 534 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 TCP1P17987 556 aaKnown RBP11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 AOAHP28039 575 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ATP5J2P56134 94 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms