RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 WDR34Q96EX3 536 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 THOC3Q96J01 351 aaKnown RBP11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 OR1F2PQ96R84 312 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 TXLNGYQ9BZA5 131 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 PITHD1Q9GZP4 211 aaPredicted RBP11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 EPB41L4BQ9H329 900 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 NT5DC2Q9H857 520 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 RIC8BQ9NVN3 520 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 COPG2Q9UBF2 871 aa11.26□□□□□ -0.61
LSP1P3-201ENST00000449530 LOC102723996A0A087X1L8 192 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 IGHV3-20A0A0C4DH32 117 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 A0A1W2PQ72 361 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 ANKDD1BA6NHY2 528 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 PCDH17O14917 1159 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 CHST10O43529 356 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 KLK8O60259 260 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 KLHL41O60662 606 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 DNAJB6O75190 326 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 CLEC3AO75596 197 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 SEC24DO94855 1032 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 SIX3O95343 332 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 UQCRHP07919 91 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 FHP07954 510 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 SNRPAP09012 282 aaKnown RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 PCNAP12004 261 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 EPB42P16452 691 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 CD97P48960 835 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 SOX8P57073 446 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 SLC29A2Q14542 456 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 PCOLCEQ15113 449 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 TBCCQ15814 346 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 HIST2H2ACQ16777 129 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 TSNAXIP1Q2TAA8 658 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 HIST2H2AA3Q6FI13 130 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 TMEM205Q6UW68 189 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 KBTBD2Q8IY47 623 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 UBLCP1Q8WVY7 318 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 TSLPQ969D9 159 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 TBC1D20Q96BZ9 403 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 MS4A6EQ96DS6 147 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 FAR2Q96K12 515 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 LHPPQ9H008 270 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 ZNF700Q9H0M5 742 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 RHBGQ9H310 441 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 ZBTB20Q9HC78 741 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 LANCL2Q9NS86 450 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 C5AR2Q9P296 337 aa11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 PSMC3IPQ9P2W1 217 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 C19orf25Q9UFG5 118 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 ZNF490Q9ULM2 529 aaPredicted RBP11.25□□□□□ -0.61
LSP1P3-201ENST00000449530 LRIT2A6NDA9 550 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 B4GALT2O60909 372 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 SMIM24O75264 130 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 TBX6O95947 436 aaPredicted RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 CYC1P08574 325 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 RBP1P09455 135 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 SMIM10L1P0DMW3 83 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 COL6A2P12110 1019 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 RNH1P13489 461 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 JAK1P23458 1154 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 TNFRSF8P28908 595 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 EEF1DP29692 281 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 ARL1P40616 181 aaPredicted RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 PLA2G16P53816 162 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 MLLT10P55197 1068 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 BTN3A2P78410 334 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 RHAGQ02094 409 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 DDX39BQ13838 428 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 GTF2H2Q13888 395 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 ABRAXAS2Q15018 415 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 LGSNQ5TDP6 509 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 AGAP7PQ5VUJ5 663 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 SLC6A19Q695T7 634 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 GRHL2Q6ISB3 625 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 JMJD6Q6NYC1 403 aaPredicted RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 GTF2H2CQ6P1K8 395 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 MED27Q6P2C8 311 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 TRIM40Q6P9F5 258 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 GOLGA7Q7Z5G4 137 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 CPEB2Q7Z5Q1 589 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 ANKRD37Q7Z713 158 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 HPS6Q86YV9 775 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 CA13Q8N1Q1 262 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 RBMXL3Q8N7X1 1067 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 EIF1ADQ8N9N8 165 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 OR2L5Q8NG80 312 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 TM9SF4Q92544 642 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 MTBPQ96DY7 904 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 SMIM10Q96HG1 83 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 AGAP4Q96P64 663 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 REXO4Q9GZR2 422 aaKnown RBP11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 ACTR8Q9H981 624 aa11.24□□□□□ -0.61
LSP1P3-201ENST00000449530 COPS7BQ9H9Q2 264 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms