RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 MFSD4BQ5TF39 518 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CHSY3Q70JA7 882 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CCNYL1Q8N7R7 359 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 BANPQ8N9N5 519 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 L3MBTL4Q8NA19 623 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 OR7G3Q8NG95 312 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 OR52B6Q8NGF0 335 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 OR51Q1Q8NH59 317 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 TRPC4APQ8TEL6 797 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF473Q8WTR7 871 aaKnown RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 APOBEC4Q8WW27 367 aaKnown RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 EXTL1Q92935 676 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 MS4A6EQ96DS6 147 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CMTM7Q96FZ5 175 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CDK15Q96Q40 435 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 TMEM237Q96Q45 408 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 SPSB2Q99619 263 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 COPS7BQ9H9Q2 264 aaPredicted RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CLK4Q9HAZ1 481 aaKnown RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 ZBTB26Q9HCK0 441 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 SEMA3GQ9NS98 782 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 ARGLU1Q9NWB6 273 aaPredicted RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 PLLPQ9Y342 182 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 RNF11Q9Y3C5 154 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 IGLV3-12A0A075B6K2 115 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 H0YIV9 168 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 PSMD12O00232 456 aaPredicted RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 SPAG7O75391 227 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 TGFB1P01137 390 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 UMODP07911 640 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 TSPAN8P19075 237 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 IL10P22301 178 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 MMP11P24347 488 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 HNRNPH1P31943 449 aaKnown RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 PIK3CBP42338 1070 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 XCR1P46094 333 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 RAP1GDS1P52306 607 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 PLA2G16P53816 162 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 EMP2P54851 167 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 FOXL2P58012 376 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 NAA20P61599 178 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 SNRPNP63162 240 aaKnown RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 KLC1Q07866 573 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 ASPHQ12797 758 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 IFT88Q13099 833 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 TRAF3Q13114 568 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 ZRSR2Q15696 482 aaKnown RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 TMEM35AQ53FP2 167 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 UNC50Q53HI1 259 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 ADNP2Q6IQ32 1131 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 RPS27LQ71UM5 84 aaKnown RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 VN1R5Q7Z5H4 357 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 PDSS2Q86YH6 399 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 OR2L5Q8NG80 312 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 OR4F6Q8NGB9 312 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 HUS1BQ8NHY5 278 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 NACC2Q96BF6 587 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 L3HYPDHQ96EM0 354 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 F2RL3Q96RI0 385 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 MTERF1Q99551 399 aaKnown RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 TGIF2Q9GZN2 237 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 ROGDIQ9GZN7 287 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 STMN4Q9H169 189 aaPredicted RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 C12orf65Q9H3J6 166 aaKnown RBP13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 C3orf18Q9UK00 162 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 TSC22D4Q9Y3Q8 395 aa13.27□□□□□ -0.29
GTF3C3-206ENST00000448539 ARGFXA6NJG6 315 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 G3V2L1 256 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 B3GALT2O43825 422 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 BMP10O95393 424 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 B3GALT4O96024 378 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 PRB1P04280 392 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 SMIM10L1P0DMW3 83 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 PTX3P26022 381 aaPredicted RBP13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 RRADP55042 308 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 LCP2Q13094 533 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 ADPRMQ3LIE5 342 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 GGTA1PQ4G0N0 100 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 C10orf62Q5T681 223 aaPredicted RBP13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 MRGPREQ86SM8 312 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 ZC3H7AQ8IWR0 971 aaKnown RBP13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 TCP10LQ8TDR4 215 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 ADAMTS17Q8TE56 1095 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 SREK1Q8WXA9 508 aaKnown RBP13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 TTC9Q92623 222 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 PEX11GQ96HA9 241 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 SMIM10Q96HG1 83 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 FER1L6-AS2Q96M78 137 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 KCNC2Q96PR1 638 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 FAM111AQ96PZ2 611 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 OR1F2PQ96R84 312 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 MS4A8Q9BY19 250 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 ELOVL6Q9H5J4 265 aa13.26□□□□□ -0.29
GTF3C3-206ENST00000448539 ACSS2Q9NR19 701 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms