RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 IGFL2Q6UWQ7 119 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 TRMT10CQ7L0Y3 403 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 ANKRD37Q7Z713 158 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 ZADH2Q8N4Q0 377 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 TTLQ8NG68 377 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 UBTD2Q8WUN7 234 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CCT6BQ92526 530 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 ISL2Q96A47 359 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 MIB2Q96AX9 1013 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 TBC1D20Q96BZ9 403 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 MS4A6EQ96DS6 147 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 OR1F2PQ96R84 312 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 RBCK1Q9BYM8 510 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 RHBGQ9H310 441 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CLMPQ9H6B4 373 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CLK4Q9HAZ1 481 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 SLAMF7Q9NQ25 335 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 OPTCQ9UBM4 332 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 B3GNT3Q9Y2A9 372 aa12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-203ENST00000448428 CPAMD8Q8IZJ3 1885 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 A0A0G2JN53 185 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 LRRC14BA6NHZ5 514 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 TRIM49D1C9J1S8 452 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 FAM227AF5H4B4 570 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 K7EPI3 171 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 KLK8O60259 260 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 B4GALT2O60909 372 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 KRT38O76015 456 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 SEC24DO94855 1032 aaPredicted RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 SERPINA7P05543 415 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 ABHD2P08910 425 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 ICAM2P13598 275 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 CNTFP26441 200 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 GSTM2P28161 218 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 GCAP28676 217 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 ALDH18A1P54886 795 aaKnown RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 BTN3A2P78410 334 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 PCDH1Q08174 1060 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 E2F2Q14209 437 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 SETDB1Q15047 1291 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 INPP5JQ15735 1006 aaPredicted RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 NSDHLQ15738 373 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 HIST2H2ACQ16777 129 aaPredicted RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 HIST2H2AA3Q6FI13 130 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 ISLR2Q6UXK2 745 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 LINC00696Q6ZRV3 163 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 Q6ZS92 163 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 TEX9Q8N6V9 391 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 CPT1CQ8TCG5 803 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 BRIX1Q8TDN6 353 aaKnown RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 TM9SF4Q92544 642 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 GAL3ST3Q96A11 431 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 FAR2Q96K12 515 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 LMF1Q96S06 567 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 WDR77Q9BQA1 342 aaPredicted RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 TUBB6Q9BUF5 446 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 EFCAB11Q9BUY7 163 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 L2HGDHQ9H9P8 463 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 RIC8BQ9NVN3 520 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 C19orf25Q9UFG5 118 aaPredicted RBP12□□□□□ -0.49
PRPF40A-203ENST00000448428 CSAG2Q9Y5P2 127 aa12□□□□□ -0.49
PRPF40A-203ENST00000448428 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 HELZ2Q9BYK8 2649 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 EXOC1LA0A1B0GW35 172 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 MAGEB17A8MXT2 336 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 RIPK2O43353 540 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 ERI3O43414 337 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 ITGAMP11215 1152 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 RNH1P13489 461 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 GFAPP14136 432 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 EPB42P16452 691 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 BTG2P78543 158 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 MFAP5Q13361 173 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 RUNX2Q13950 521 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 NAA30Q147X3 362 aaPredicted RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 ABRAXAS2Q15018 415 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 PCBP2Q15366 365 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 ADPRMQ3LIE5 342 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 PRR30Q53SZ7 412 aaPredicted RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 TECRLQ5HYJ1 363 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 CRB2Q5IJ48 1285 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 PAGE2BQ5JRK9 111 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 RIPOR1Q6ZS17 1223 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 TAOK1Q7L7X3 1001 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 CA13Q8N1Q1 262 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 SIRT6Q8N6T7 355 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 OR2L5Q8NG80 312 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 DNAJB14Q8TBM8 379 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 TSLPQ969D9 159 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 QRFPRQ96P65 431 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 F2RL3Q96RI0 385 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 REXO4Q9GZR2 422 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 PTGFRNQ9P2B2 879 aa11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 CPSF2Q9P2I0 782 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-203ENST00000448428 PRMT3O60678 531 aa11.98□□□□□ -0.49
PRPF40A-203ENST00000448428 SIX3O95343 332 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms