RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CATSPERBQ9H7T0 1116 aa4.56□□□□□ -1.68
SDCBP-205ENST00000447267 ATXN10Q9UBB4 475 aa4.56□□□□□ -1.68
SDCBP-205ENST00000447267 NDRG3Q9UGV2 375 aa4.56□□□□□ -1.68
SDCBP-205ENST00000447267 HPCAL4Q9UM19 191 aa4.56□□□□□ -1.68
SDCBP-205ENST00000447267 LIPT1Q9Y234 373 aa4.56□□□□□ -1.68
SDCBP-205ENST00000447267 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
SDCBP-205ENST00000447267 ABCA13Q86UQ4 5058 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 PHF3Q92576 2039 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 IGLV3-10A0A075B6K4 115 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CXorf51AA0A1B0GTR3 108 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 UNC119BA6NIH7 251 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 BCKDKO14874 412 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 KDELR3O43731 214 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 PEX1O43933 1283 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 NRP2O60462 931 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 EXOC3O60645 756 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 PPP1R3DO95685 299 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 SOD3P08294 240 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF7P17097 686 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CXCR2P25025 360 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 PRDX3P30048 256 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CEACAM8P31997 349 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CYLC1P35663 651 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 LONP1P36776 959 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 GABRA4P48169 554 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 RPL34P49207 117 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CARSP49589 748 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CCR8P51685 355 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 EMP2P54851 167 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 MTTPP55157 894 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 LGALS4P56470 323 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 NRG3P56975 720 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 GEMIN4P57678 1058 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 FAPQ12884 760 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CAMK4Q16566 473 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 RUSC1-AS1Q66K80 236 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 ARL6IP4Q66PJ3 421 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 DRICH1Q6PGQ1 229 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 SRLQ86TD4 932 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 TRIM73Q86UV7 250 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 DNAAF5Q86Y56 855 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CMIPQ8IY22 773 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CLRN3Q8NCR9 226 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 FBXO18Q8NFZ0 1043 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 OR2W6PQ8NHA6 318 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 EXD1Q8NHP7 514 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 C16orf52Q8NHV5 167 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 STT3BQ8TCJ2 826 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 CREB3L4Q8TEY5 395 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 LINC00476Q8WZB0 136 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 MARK4Q96L34 752 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 IMMP1LQ96LU5 166 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 WDR83Q9BRX9 315 aaKnown RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 C1QTNF5Q9BXJ0 243 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 SLC26A1Q9H2B4 701 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 TOR3AQ9H497 397 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 PANK4Q9NVE7 773 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 VPS18Q9P253 973 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF629Q9UEG4 869 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-205ENST00000447267 KLHL21Q9UJP4 597 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 POMT2Q9UKY4 750 aa4.55□□□□□ -1.68
SDCBP-205ENST00000447267 MALRD1Q5VYJ5 2156 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 PINLYPA6NC86 204 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 NPIPB15A6NHN6 443 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 M0QYV0 167 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 RNASET2O00584 256 aaKnown RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 TRAFD1O14545 582 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 SCAMP2O15127 329 aaKnown RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 WDR1O75083 606 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 HKR1P10072 659 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 CTPS1P17812 591 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 MCM3P25205 808 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 GCLMP48507 274 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 TERF1P54274 439 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 PPIAP62937 165 aaKnown RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 BCL2L1Q07817 233 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 TP53BP2Q13625 1128 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 MEP1AQ16819 746 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ATP13A4Q4VNC1 1196 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 SHC4Q6S5L8 630 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 LCLAT1Q6UWP7 414 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 MAATS1Q7Z4T9 603 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 STRA8Q7Z7C7 330 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 HORMAD2Q8N7B1 307 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF611Q8N823 705 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 POGLUT1Q8NBL1 392 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 RASSF8Q8NHQ8 419 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF418Q8TF45 676 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 HTRA1Q92743 480 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 SEMA4DQ92854 862 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ECHDC3Q96DC8 303 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF764Q96H86 408 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-205ENST00000447267 HSFY1Q96LI6 401 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 HS6ST2Q96MM7 605 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 QRFPRQ96P65 431 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 MAGEB5Q9BZ81 275 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 IMPG2Q9BZV3 1241 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ZYG11BQ9C0D3 744 aa4.54□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF700Q9H0M5 742 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms