RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 STXBP1P61764 594 aaKnown RBP14□□□□□ -0.17
HDAC4-204ENST00000446876 BTN3A2P78410 334 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 LAPTM5Q13571 262 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 GTF2H2Q13888 395 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 E2F2Q14209 437 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 PAGE2BQ5JRK9 111 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 FAM219BQ5XKK7 198 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 GTF2H2CQ6P1K8 395 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 CYP4X1Q8N118 509 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 TMEM151AQ8N4L1 468 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 OR2W6PQ8NHA6 318 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 GAL3ST3Q96A11 431 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 MS4A6EQ96DS6 147 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 NSUN5Q96P11 429 aaKnown RBP14□□□□□ -0.17
HDAC4-204ENST00000446876 F2RL3Q96RI0 385 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 MRPL57Q9BQC6 102 aaKnown RBP14□□□□□ -0.17
HDAC4-204ENST00000446876 CCDC77Q9BR77 488 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 PITHD1Q9GZP4 211 aaPredicted RBP14□□□□□ -0.17
HDAC4-204ENST00000446876 MRPL46Q9H2W6 279 aaKnown RBP14□□□□□ -0.17
HDAC4-204ENST00000446876 RHBGQ9H310 441 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 MLXIPLQ9NP71 852 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 ATP13A2Q9NQ11 1180 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 LANCL2Q9NS86 450 aa14□□□□□ -0.17
HDAC4-204ENST00000446876 URADA6NGE7 173 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 A8MT66 165 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 SLC28A2O43868 658 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 HPP00738 406 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 C8orf89P0DMQ9 161 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 AIMP2Q13155 320 aaKnown RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 DDX39BQ13838 428 aaKnown RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 PCOLCEQ15113 449 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 HIST2H2ACQ16777 129 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 ERCC6LQ2NKX8 1250 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 HIST2H2AA3Q6FI13 130 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 GRHL2Q6ISB3 625 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 MED27Q6P2C8 311 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 TMEM205Q6UW68 189 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF605Q86T29 641 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 LAS2Q8IYD9 372 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 CA13Q8N1Q1 262 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 AENQ8WTP8 325 aaKnown RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF473Q8WTR7 871 aaKnown RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.99□□□□□ -0.177e-7■■■■■ 59.5
HDAC4-204ENST00000446876 TSLPQ969D9 159 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 NACC2Q96BF6 587 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 CDK15Q96Q40 435 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 TRIM4Q9C037 500 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 REXO4Q9GZR2 422 aaKnown RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 NOL11Q9H8H0 719 aaKnown RBP13.99□□□□□ -0.17
HDAC4-204ENST00000446876 IPPKQ9H8X2 491 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 ACTR8Q9H981 624 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 PCTPQ9UKL6 214 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF462Q96JM2 2506 aa13.99□□□□□ -0.17
HDAC4-204ENST00000446876 IGHV1-45A0A0A0MS14 117 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 NSG1A0A0A6YYJ2 146 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 FAM227AF5H4B4 570 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 STX16-NPEPL1H3BU86 382 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 OR7A17O14581 309 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 STX16O14662 325 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 SUV39H1O43463 412 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 B4GALT2O60909 372 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 FHP07954 510 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 PLA2G2AP14555 144 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 TSPAN8P19075 237 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 CERS1P27544 350 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 GSTM2P28161 218 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 ARL1P40616 181 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-204ENST00000446876 PIK3CGP48736 1102 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 SKP1P63208 163 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 RHAGQ02094 409 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 PCDH1Q08174 1060 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 RUNX2Q13950 521 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 MYBPC3Q14896 1274 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 ADPRMQ3LIE5 342 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 NADK2Q4G0N4 442 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 OR2L5Q8NG80 312 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 OR7G3Q8NG95 312 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 OR52B6Q8NGF0 335 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 TBC1D20Q96BZ9 403 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 THOC3Q96J01 351 aaKnown RBP13.98□□□□□ -0.17
HDAC4-204ENST00000446876 FAR2Q96K12 515 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 QRFPRQ96P65 431 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 OR1F2PQ96R84 312 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 MS4A8Q9BY19 250 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF552Q9H707 407 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-204ENST00000446876 ZBTB20Q9HC78 741 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-204ENST00000446876 ZBTB26Q9HCK0 441 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 TMCO1Q9UM00 188 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 G3BP2Q9UN86 482 aaKnown RBP13.98□□□□□ -0.17
HDAC4-204ENST00000446876 RNF11Q9Y3C5 154 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF451Q9Y4E5 1061 aa13.98□□□□□ -0.17
HDAC4-204ENST00000446876 TNPO3Q9Y5L0 923 aaKnown RBP13.98□□□□□ -0.17
HDAC4-204ENST00000446876 LOC102723996A0A087X1L8 192 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 SAP18O00422 153 aaKnown RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 RTCAO00442 366 aaKnown RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 SEC24DO94855 1032 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 TGFB1P01137 390 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 RPS17P08708 135 aaKnown RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 CD97P48960 835 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms