RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 HSPA8P11142 646 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 HNRNPA2B1P22626 353 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 GLRA2P23416 452 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 MARCKSP29966 332 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRDX6P30041 224 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 MNDAP41218 407 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 NSFP46459 744 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 HOXA1P49639 335 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 MLLT10P55197 1068 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 CX3CL1P78423 397 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 GPM6BQ13491 265 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 RIPK1Q13546 671 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 KIR2DS3Q14952 304 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 ACCSLQ4AC99 568 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 ATAD3BQ5T9A4 648 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 KLHL10Q6JEL2 608 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 CD164L2Q6UWJ8 174 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 PACS1Q6VY07 963 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 C15orf52Q6ZUT6 534 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SLC16A9Q7RTY1 509 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 CUZD1Q86UP6 607 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 PTOV1Q86YD1 416 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SIDT2Q8NBJ9 832 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR52B4Q8NGK2 314 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 FGFBP3Q8TAT2 258 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 DQX1Q8TE96 717 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SAP25Q8TEE9 199 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 CTNNBL1Q8WYA6 563 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 HAS2Q92819 552 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 FAM20AQ96MK3 541 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 TAAR6Q96RI8 345 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 TRMT61BQ9BVS5 477 aaKnown RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZNF416Q9BWM5 594 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 RAB33BQ9H082 229 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 MMP28Q9H239 520 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 ARRDC1-AS1Q9H2J1 176 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 ACTL8Q9H568 366 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 TMEM231Q9H6L2 316 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 TRPC7Q9HCX4 862 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SNX6Q9UNH7 406 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SMC3Q9UQE7 1217 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 URB2Q14146 1524 aaKnown RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 KIAA1210Q9ULL0 1709 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 A0A0U1RRA0 63 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 FAM230AA0A1W2PPH8 454 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 TRIM49BA6NDI0 452 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZSCAN5CA6NGD5 496 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 C17orf105B2RV13 164 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 CHADO15335 359 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 LANCL1O43813 399 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ACSL4O60488 711 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 RNASEH1O60930 286 aaKnown RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 GMNNO75496 209 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 STBD1O95210 358 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 IGLV2-11P01706 119 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 LIPFP07098 398 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 KRT19P08727 400 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 NUDT17P0C025 328 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 CETPP11597 493 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 SFTPCP11686 197 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 CYP2F1P24903 491 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 NKX2-1P43699 371 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 VAMP7P51809 220 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 PDX1P52945 283 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 SSTP61278 116 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 FKBP1BP68106 108 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 MBTD1Q05BQ5 628 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 GABPB1Q06547 395 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 SLC3A1Q07837 685 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 DMPKQ09013 629 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ABRQ12979 859 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 MRPL28Q13084 256 aaKnown RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 RBBP5Q15291 538 aaKnown RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 KRT31Q15323 416 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 CARTPTQ16568 116 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 CYP4A22Q5TCH4 519 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 SULT1C3Q6IMI6 304 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 FUT10Q6P4F1 479 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 TMEM26Q6ZUK4 368 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 LONP2Q86WA8 852 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 TDHQ8IZJ6 230 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 LGI2Q8N0V4 545 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 METTL27Q8N6F8 245 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 FAM133AQ8N9E0 248 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 NOA1Q8NC60 698 aaKnown RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 FAM71CQ8NEG0 241 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 RDM1Q8NG50 284 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR11H4Q8NGC9 324 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 IRGQQ8WZA9 623 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 PIGBQ92521 554 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 RFT1Q96AA3 541 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ULK4Q96C45 1275 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 OXNAD1Q96HP4 312 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 COQ7Q99807 217 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 PIGQQ9BRB3 760 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 FTHL17Q9BXU8 183 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 POLR1EQ9GZS1 481 aaKnown RBP4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 TRPV6Q9H1D0 765 aa4.05□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZDHHC6Q9H6R6 413 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms