RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 XKR7Q5GH72 579 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 ACSM2BQ68CK6 577 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 CGB2Q6NT52 195 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 CEACAM20Q6UY09 585 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 GAL3ST3Q96A11 431 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 APIPQ96GX9 242 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 PPP3R2Q96LZ3 170 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 KCNC2Q96PR1 638 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 TBCDQ9BTW9 1192 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 ASPSCR1Q9BZE9 553 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 ACTR5Q9H9F9 607 aaPredicted RBP16.55■□□□□ 0.24
SGCE-206ENST00000445866 C1orf109Q9NX04 203 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 GIMAP2Q9UG22 337 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 NDOR1Q9UHB4 597 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 ANKRD12Q6UB98 2062 aa16.55■□□□□ 0.24
SGCE-206ENST00000445866 PLPP1O14494 284 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 LSM1O15116 133 aaKnown RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 SHOX2O60902 331 aaPredicted RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 SMIM10L1P0DMW3 83 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 ALOX15P16050 662 aaPredicted RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 SNRPNP63162 240 aaKnown RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 DEFB134Q4QY38 66 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 TMEM164Q5U3C3 297 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 METTL4Q8N3J2 472 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 ARHGEF39Q8N4T4 335 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 C1orf52Q8N6N3 182 aaKnown RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 SMIM10Q96HG1 83 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 C10orf90Q96M02 699 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 SIKE1Q9BRV8 207 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 ZPBPQ9BS86 351 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 SORBS1Q9BX66 1292 aaKnown RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 KCNK13Q9HB14 408 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 ANKHQ9HCJ1 492 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 PRDM7Q9NQW5 492 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 DHCR7Q9UBM7 475 aaKnown RBP16.54■□□□□ 0.24
SGCE-206ENST00000445866 B3GALT1Q9Y5Z6 326 aa16.54■□□□□ 0.24
SGCE-206ENST00000445866 SEMA3DO95025 777 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 TNFSF15O95150 251 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 TIAF1O95411 115 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 KLK1P06870 262 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ID4P47928 161 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 FAM53BQ14153 422 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 RFTN2Q52LD8 501 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 C6orf136Q5SQH8 315 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 YOD1Q5VVQ6 348 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 ACAD11Q709F0 780 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 LARP4Q71RC2 724 aaKnown RBP eCLIP16.53■□□□□ 0.24
SGCE-206ENST00000445866 PAGE2Q7Z2X7 111 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 CLIP3Q96DZ5 547 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 RILPQ96NA2 401 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 OR52B2Q96RD2 323 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 CCT8L2Q96SF2 557 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 NAALAD2Q9Y3Q0 740 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 PCDHB3Q9Y5E6 796 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 A0A088AWK7 358 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 A0A0A6YYC8 382 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 SRRM3A6NNA2 597 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 C4orf51C9J302 202 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 I3L1I5 382 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 MYO1DO94832 1006 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 MED26O95402 600 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 GBAP04062 536 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 HBQ1P09105 142 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 IL1RNP18510 177 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ZNF10P21506 573 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 BSGP35613 385 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 SSR2P43308 183 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ARFIP2P53365 341 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 FOXC1Q12948 553 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 SPIN4Q56A73 249 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 C1orf189Q5VU69 101 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 PRSS41Q7RTY9 318 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 COMMD6Q7Z4G1 85 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 SPATA21Q7Z572 469 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ZFAND4Q86XD8 727 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 FNDC5Q8NAU1 212 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 OR9A4Q8NGU2 314 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 CEP70Q8NHQ1 597 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ACTRT2Q8TDY3 377 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 PMEPA1Q969W9 287 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 QRFPRQ96P65 431 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 TEFMQ96QE5 360 aaKnown RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 EBF4Q9BQW3 602 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ROGDIQ9GZN7 287 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 COPS7BQ9H9Q2 264 aaPredicted RBP16.53■□□□□ 0.24
SGCE-206ENST00000445866 POLR1BQ9H9Y6 1135 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 LHX9Q9NQ69 397 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 CDC14AQ9UNH5 594 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 SRPK3Q9UPE1 567 aa16.53■□□□□ 0.24
SGCE-206ENST00000445866 ARHGAP10A1A4S6 786 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 SGK494L7N484 410 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 FOXS1O43638 330 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 GALR3O60755 368 aaPredicted RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 EEDO75530 441 aaKnown RBP16.52■□□□□ 0.23
SGCE-206ENST00000445866 KIAA0754O94854 1291 aa16.52■□□□□ 0.23
SGCE-206ENST00000445866 KLHL18O94889 574 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms