RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 REEP4Q9H6H4 257 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 EBF1Q9UH73 591 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 GLOD5A6NK44 160 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 PRKRAO75569 313 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 LAMP2P13473 410 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 CDH2P19022 906 aaPredicted RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 NR4A1P22736 598 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 SLC5A2P31639 672 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 RGNQ15493 299 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 PARP8Q8N3A8 854 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 COX14Q96I36 57 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 MBOAT4Q96T53 435 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 INSM2Q96T92 566 aaPredicted RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 PRDM8Q9NQV8 689 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 FAM118AQ9NWS6 357 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZNF639Q9UID6 485 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 SAMD4AQ9UPU9 718 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 SAMHD1Q9Y3Z3 626 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 NUP210Q8TEM1 1887 aaPredicted RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 A0A087WXM4 84 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 ALPPL2P10696 532 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 EPHA2P29317 976 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 PRIM2P49643 509 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 DGKEP52429 567 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 PMS2P3Q13401 168 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 GPR107Q5VW38 600 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 TMEM26Q6ZUK4 368 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 KCTD8Q6ZWB6 473 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 GPR141Q7Z602 305 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 HMGN2P46Q86SG4 172 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 LSRQ86X29 649 aaPredicted RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 AMER3Q8N944 861 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZNF555Q8NEP9 628 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 FLCNQ8NFG4 579 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 CNIH3Q8TBE1 160 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 EXOSC8Q96B26 276 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 NAA50Q9GZZ1 169 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 PDP1Q9P0J1 537 aaPredicted RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 DMTF1Q9Y222 760 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 TESMINQ9Y4I5 508 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 FOXD2O60548 495 aaPredicted RBP16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 VASPP50552 380 aaPredicted RBP16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 TFF2Q03403 129 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 DMPKQ09013 629 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 HSPB3Q12988 150 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 ANKRD54Q6NXT1 300 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 SERPINA11Q86U17 422 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 LINC01555Q8NAE3 123 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 NFKBIDQ8NI38 313 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 FCRL1Q96LA6 429 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 OSBPL10Q9BXB5 764 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 SLC6A16Q9GZN6 736 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 FABP3P05413 133 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 HSD3B1P14060 373 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 GPX2P18283 190 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 HSD3B2P26439 372 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 IL5RAQ01344 420 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 TNFAIP8L2Q6P589 184 aaPredicted RBP16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 C8orf59Q8N0T1 100 aaPredicted RBP16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 ATG16L2Q8NAA4 619 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZFP90Q8TF47 636 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 CLDND1Q9NY35 253 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 KIF17Q9P2E2 1029 aa16.09■□□□□ 0.17
LAPTM4B-201ENST00000445593 C17orf113A0A1B0GUU1 675 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 PLPP1O14494 284 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 SNRNP200O75643 2136 aaKnown RBP16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 CD72P21854 359 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 PPP2CBP62714 309 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 PPP2CAP67775 309 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 PPP2R2BQ00005 443 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 SLC5A12Q1EHB4 618 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 KCTD21Q4G0X4 260 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 ADAMTSL4Q6UY14 1074 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 GALNT13Q8IUC8 556 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 FRMD1Q8N878 549 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 OR5K2Q8NHB8 316 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 LINC00615Q96LM1 132 aaPredicted RBP16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 TRIT1Q9H3H1 467 aaKnown RBP16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 COMMD3-BMI1R4GMX3 469 aa16.08■□□□□ 0.17
LAPTM4B-201ENST00000445593 SCN3AQ9NY46 2000 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 K7EQS6 105 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 XPNPEP2O43895 674 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 FURINP09958 794 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 IGFBP5P24593 272 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 MAPK12P53778 367 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 ESRRGP62508 458 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 MLF2Q15773 248 aaPredicted RBP16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 TMEM196Q5HYL7 178 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 METRNLQ641Q3 311 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 OR2T5Q6IEZ7 315 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 B3GNT6Q6ZMB0 384 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 R3HCC1LQ7Z5L2 792 aaKnown RBP16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 CYP4Z1Q86W10 505 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 OR2T29Q8NH02 315 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 OR5K1Q8NHB7 308 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 ZFAND2BQ8WV99 257 aa16.08■□□□□ 0.16
LAPTM4B-201ENST00000445593 RAB7BQ96AH8 199 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms