RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TMPRSS12Q86WS5 348 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 SRFBP1Q8NEF9 429 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 RGMAQ96B86 450 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 QRFPRQ96P65 431 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 TEFMQ96QE5 360 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 NLNQ9BYT8 704 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 STRADBQ9C0K7 418 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 DDX31Q9H8H2 851 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 FANCEQ9HB96 536 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ASIC5Q9NY37 505 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ADAM29Q9UKF5 820 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 TMED5Q9Y3A6 229 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 URADA6NGE7 173 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ERI3O43414 337 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ZNF888P0CJ79 500 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ALOX12P18054 663 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 TPP2P29144 1249 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 EIF3IQ13347 325 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 SPDYAQ5MJ70 313 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 OR4C11Q6IEV9 310 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 TRIM40Q6P9F5 258 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ZNF793Q6ZN11 406 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ACAD11Q709F0 780 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 COMMD6Q7Z4G1 85 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 PDSS2Q86YH6 399 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 C1orf52Q8N6N3 182 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 ANKS4BQ8N8V4 417 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 AMER3Q8N944 861 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 BCAS4Q8TDM0 211 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 N4BP2L2Q92802 583 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 KCNC2Q96PR1 638 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 C17orf62Q9BQA9 187 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 TBCDQ9BTW9 1192 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 SORBS1Q9BX66 1292 aaKnown RBP14.36□□□□□ -0.11
CCNE1-203ENST00000444983 APMAPQ9HDC9 416 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 AHSPQ9NZD4 102 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 RARRES3Q9UL19 164 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
CCNE1-203ENST00000444983 SCN3AQ9NY46 2000 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 FOXS1O43638 330 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 TIAF1O95411 115 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 PLA2G16P53816 162 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 RAB8AP61006 207 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 RPL38P63173 70 aaKnown RBP14.35□□□□□ -0.11
CCNE1-203ENST00000444983 FOXM1Q08050 763 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 ACSM2AQ08AH3 577 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 FAM214AQ32MH5 1076 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCNE1-203ENST00000444983 GKAP1Q5VSY0 366 aaPredicted RBP14.35□□□□□ -0.11
CCNE1-203ENST00000444983 PRAMEF17Q5VTA0 474 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 YOD1Q5VVQ6 348 aaPredicted RBP14.35□□□□□ -0.11
CCNE1-203ENST00000444983 TMEM198Q66K66 360 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 ACSM2BQ68CK6 577 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 NOXRED1Q6NXP6 359 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 ABHD13Q7L211 337 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 RAB11FIP2Q7L804 512 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 GPR135Q8IZ08 494 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 ZCCHC7Q8N3Z6 543 aaKnown RBP14.35□□□□□ -0.11
CCNE1-203ENST00000444983 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCNE1-203ENST00000444983 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 DLGAP4Q9Y2H0 992 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 PCDHB3Q9Y5E6 796 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 SEC16AO15027 2179 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 FER1L5A0AVI2 2057 aa14.35□□□□□ -0.11
CCNE1-203ENST00000444983 CCDC187A0A096LP49 1063 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 A0A0A6YYD5 115 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 AGRPO00253 132 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 ZNF749O43361 778 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 GALR3O60755 368 aaPredicted RBP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 EEDO75530 441 aaKnown RBP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 B3GALT4O96024 378 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 HIST1H1TP22492 207 aaPredicted RBP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 MRPL19P49406 292 aaKnown RBP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 DIO3P55073 304 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 TARDBPQ13148 414 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 HERC3Q15034 1050 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 DEFB134Q4QY38 66 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 PWWP2BQ6NUJ5 590 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 CYB5D1Q6P9G0 228 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 TMPRSS7Q7RTY8 843 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 PRSS41Q7RTY9 318 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 SPATA19Q7Z5L4 167 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 CLNKQ7Z7G1 428 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 NUDT13Q86X67 352 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 PPP1R3BQ86XI6 285 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 FNDC5Q8NAU1 212 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 SLC38A9Q8NBW4 561 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 ZNF385DQ9H6B1 395 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 CUTCQ9NTM9 273 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 AKAP7Q9P0M2 348 aaPredicted RBP14.34□□□□□ -0.11
CCNE1-203ENST00000444983 MCM8Q9UJA3 840 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 ARL2BPQ9Y2Y0 163 aa14.34□□□□□ -0.11
CCNE1-203ENST00000444983 A0A0G2JN53 185 aa14.33□□□□□ -0.11
CCNE1-203ENST00000444983 DCDC2BA2VCK2 349 aa14.33□□□□□ -0.11
CCNE1-203ENST00000444983 PMS2P1A4D2B8 440 aa14.33□□□□□ -0.11
CCNE1-203ENST00000444983 E9PBE3 544 aa14.33□□□□□ -0.11
CCNE1-203ENST00000444983 NDUFAB1O14561 156 aa14.33□□□□□ -0.11
CCNE1-203ENST00000444983 ANKRD28O15084 1053 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms