RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 VPS11Q9H270 941 aa10.54□□□□□ -0.72
PRKD3-203ENST00000443187 EHD1Q9H4M9 534 aa10.54□□□□□ -0.72
PRKD3-203ENST00000443187 NT5DC2Q9H857 520 aa10.54□□□□□ -0.72
PRKD3-203ENST00000443187 CNOT10Q9H9A5 744 aaKnown RBP10.54□□□□□ -0.72
PRKD3-203ENST00000443187 L2HGDHQ9H9P8 463 aa10.54□□□□□ -0.72
PRKD3-203ENST00000443187 NTNG1Q9Y2I2 539 aa10.54□□□□□ -0.72
PRKD3-203ENST00000443187 CLDN16Q9Y5I7 305 aa10.54□□□□□ -0.72
PRKD3-203ENST00000443187 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
PRKD3-203ENST00000443187 CNTRLQ7Z7A1 2325 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TTLL8A6PVC2 850 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TRIM49D1C9J1S8 452 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TGFBR3LH3BV60 316 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 K7EPI3 171 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CLGNO14967 610 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 RIPK2O43353 540 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 B4GALT2O60909 372 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 H2AFYO75367 372 aaKnown RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 SIX3O95343 332 aaPredicted RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 SERPINA7P05543 415 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 FHP07954 510 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 INHBAP08476 426 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CXCR2P25025 360 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CASP2P42575 452 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 UQCRFS1P47985 274 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 HNRNPFP52597 415 aaKnown RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 BTN3A2P78410 334 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 KCNC4Q03721 635 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 PCDH1Q08174 1060 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 SETDB1Q15047 1291 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 ACAP2Q15057 778 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 INPP5JQ15735 1006 aaPredicted RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 PFKFB4Q16877 469 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 FAM83EQ2M2I3 478 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 LINC00696Q6ZRV3 163 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 Q6ZS92 163 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CEP128Q6ZU80 1094 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 ABHD13Q7L211 337 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 LRRC70Q7Z2Q7 622 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CPEB2Q7Z5Q1 589 aaKnown RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 IFT20Q8IY31 132 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 KBTBD2Q8IY47 623 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TBC1D19Q8N5T2 526 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 SIRT6Q8N6T7 355 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 PLPP5Q8NEB5 264 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CATSPER1Q8NEC5 780 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CPT1CQ8TCG5 803 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TBC1D20Q96BZ9 403 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 PTCD3Q96EY7 689 aaKnown RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 OR1F2PQ96R84 312 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 NPAS2Q99743 824 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 TSPYL1Q9H0U9 437 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 RHBGQ9H310 441 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 CLMPQ9H6B4 373 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 PLA2G3Q9NZ20 509 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 PTGFRNQ9P2B2 879 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 ZNF180Q9UJW8 692 aa10.53□□□□□ -0.72
PRKD3-203ENST00000443187 G3BP2Q9UN86 482 aaKnown RBP10.53□□□□□ -0.72
PRKD3-203ENST00000443187 HECTD1Q9ULT8 2610 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 A0A087WUV0 522 aaPredicted RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 IGKV3D-11A0A0A0MRZ8 115 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 FOXO6A8MYZ6 492 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ERI3O43414 337 aaKnown RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 MAN1A2O60476 641 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 SH3BGRLO75368 114 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 CLEC3AO75596 197 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 F10P00742 488 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 S100BP04271 92 aaPredicted RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ALPPP05187 535 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ABHD2P08910 425 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 MAOAP21397 527 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 MSH2P43246 934 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 PLA2G16P53816 162 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 IRF8Q02556 426 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 MFAP5Q13361 173 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 NAA30Q147X3 362 aaPredicted RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ABRAXAS2Q15018 415 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 TBCCQ15814 346 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 SFT2D3Q587I9 215 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 AGAP7PQ5VUJ5 663 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ABHD17CQ6PCB6 329 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ZNF793Q6ZN11 406 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 RPS27LQ71UM5 84 aaKnown RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 HPS6Q86YV9 775 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 LAS2Q8IYD9 372 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 KRT78Q8N1N4 520 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 TEX9Q8N6V9 391 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 ZNF473Q8WTR7 871 aaKnown RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 CCT6BQ92526 530 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 GAL3ST3Q96A11 431 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 SNRNP40Q96DI7 357 aaKnown RBP10.52□□□□□ -0.73
PRKD3-203ENST00000443187 AGAP4Q96P64 663 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 EFCAB11Q9BUY7 163 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 NECTIN3Q9NQS3 549 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 PRDM7Q9NQW5 492 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 RIC8BQ9NVN3 520 aa10.52□□□□□ -0.73
PRKD3-203ENST00000443187 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms