RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MRPL1Q9BYD6 325 aaKnown RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 SRMSQ9H3Y6 488 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 POT1Q9NUX5 634 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 TMEM45AQ9NWC5 275 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 ASIC5Q9NY37 505 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 ERGIC3Q9Y282 383 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 PCDHGA8Q9Y5G5 932 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 MAGEB17A8MXT2 336 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 H3BSA7 217 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 NR5A2O00482 541 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 CELA2BP08218 269 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 XRCC1P18887 633 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 MAPK1P28482 360 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 CPOXP36551 454 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 PGM1P36871 562 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 NXPH1P58417 271 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 ABATP80404 500 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 MEF2AQ02078 507 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 ART3Q13508 389 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 KIAA0040Q15053 153 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 RGS21Q2M5E4 152 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 PPP4R4Q6NUP7 873 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 FAM129CQ86XR2 697 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 FAM9CQ8IZT9 166 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 RNF175Q8N4F7 328 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 OR4E2Q8NGC2 313 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 ADAMTS16Q8TE57 1224 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 METTL2AQ96IZ6 378 aaKnown RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 C12orf4Q9NQ89 552 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 PRMT8Q9NR22 394 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 CUEDC1Q9NWM3 386 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-201ENST00000442201 CPNE7Q9UBL6 633 aa7.75□□□□□ -1.17
CCDC39-201ENST00000442201 H7BY64 318 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 FOXE1O00358 373 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 BCAT2O15382 392 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 NRP2O60462 931 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TNFAIP8O95379 198 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 C8BP07358 591 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PCSK2P16519 638 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CSNK1EP49674 416 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 C21orf59P57076 290 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 KCNK10P57789 538 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 UFM1P61960 85 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 HNRNPKP61978 463 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 YBX1P67809 324 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ACSM2AQ08AH3 577 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 OXA1LQ15070 435 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SF1Q15637 639 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CCNJQ5T5M9 372 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 AGAP7PQ5VUJ5 663 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ACSM2BQ68CK6 577 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 IDO2Q6ZQW0 420 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ADCK2Q7Z695 626 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 WDR5BQ86VZ2 330 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF740Q8NDX6 193 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SLC37A2Q8TED4 501 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TSPEARQ8WU66 669 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PATE1Q8WXA2 126 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 JPH3Q8WXH2 748 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SLC22A18Q96BI1 424 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 APIPQ96GX9 242 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 APOLD1Q96LR9 279 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PRAP1Q96NZ9 151 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SPNS1Q9H2V7 528 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 MARCH7Q9H992 704 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SPASTQ9UBP0 616 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 RBMX2Q9Y388 322 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ZSCAN5BA6NJL1 495 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SNTNA6NMZ2 147 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 BBIP1A8MTZ0 92 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ISM1B1AKI9 464 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 H3BNX3 289 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TRIM77I1YAP6 450 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ANGPT2O15123 496 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TSPAN9O75954 239 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CCNDBP1O95273 360 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CHRM5P08912 532 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PRPS2P11908 318 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 BCKDHAP12694 445 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ITGAXP20702 1163 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PIK3CBP42338 1070 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 RPS13P62277 151 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TJAP1Q5JTD0 557 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ADNP2Q6IQ32 1131 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 BLOC1S3Q6QNY0 202 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 C16orf89Q6UX73 402 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 DHDDSQ86SQ9 333 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 GKN2Q86XP6 184 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 NAGSQ8N159 534 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 LIX1Q8N485 282 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 MINDY2Q8NBR6 621 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 OR4K1Q8NGD4 311 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PROKR1Q8TCW9 393 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TP53INP1Q96A56 240 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ZBTB18Q99592 522 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 NPAS2Q99743 824 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 THTPAQ9BU02 230 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PITHD1Q9GZP4 211 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms