RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 B2MP61769 119 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 RRAS2P62070 204 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 CDH18Q13634 790 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 GLYR1Q49A26 553 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 SLC37A3Q8NCC5 494 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 ZNF296Q8WUU4 475 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 MTERF3Q96E29 417 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 HYLS1Q96M11 299 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 QRFPRQ96P65 431 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 RAD9AQ99638 391 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 INPP5KQ9BT40 448 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 NUPL2O15504 423 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 RAMP2O60895 175 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 GJB5O95377 273 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 CHRM5P08912 532 aaPredicted RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 IRF1P10914 325 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 RHOQP17081 205 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 RENBPP51606 427 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 CLVS2Q5SYC1 327 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 LCN1P1Q5VSP4 162 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 ATG9BQ674R7 924 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 CRELD1Q96HD1 420 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 FAM129BQ96TA1 746 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 ELF5Q9UKW6 265 aaPredicted RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 NDRG2Q9UN36 371 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 DUSP12Q9UNI6 340 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 ARL5AQ9Y689 179 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 KCNJ13O60928 360 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 RFPL3O75679 317 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 ATF6P18850 670 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 HK3P52790 923 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 RPS24P62847 133 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 SLC14A1Q13336 389 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 LARS2Q15031 903 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 PDE12Q6L8Q7 609 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
PMS1-213ENST00000441310 CPA6Q8N4T0 437 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 OR7D4Q8NG98 312 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 OR13C4Q8NGS5 318 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 HSH2DQ96JZ2 352 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 GPR21Q99679 349 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 AARSD1Q9BTE6 412 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 SPNS1Q9H2V7 528 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 MIXL1Q9H2W2 232 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 PRDM5Q9NQX1 630 aaPredicted RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 IMPAD1Q9NX62 359 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 RIMKLBQ9ULI2 386 aa16.16■□□□□ 0.18
PMS1-213ENST00000441310 FNDC3AQ9Y2H6 1198 aaKnown RBP16.16■□□□□ 0.18
PMS1-213ENST00000441310 E2F3O00716 465 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 CKMT1AP12532 417 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 GPR17Q13304 367 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 MRPL58Q14197 206 aaKnown RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 MSANTD2Q6P1R3 559 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 FAHD1Q6P587 224 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 TMEM81Q6P7N7 255 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 LIPIQ6XZB0 460 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 CFAP77Q6ZQR2 320 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 ZNF683Q8IZ20 524 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 C19orf18Q8NEA5 215 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 ATP6V1C2Q8NEY4 427 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 ZNF431Q8TF32 576 aaPredicted RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 UPRTQ96BW1 309 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 C1orf74Q96LT6 269 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 SMIM14Q96QK8 99 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 SEMA3CQ99985 751 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 CPPED1Q9BRF8 314 aaPredicted RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 ABCG8Q9H221 673 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 ELOVL6Q9H5J4 265 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 PAK6Q9NQU5 681 aaPredicted RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 ZNF226Q9NYT6 803 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 TSPAN3O60637 253 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 CDRT1O95170 752 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 CSTF3Q12996 717 aaKnown RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 CCDC85BQ15834 202 aaPredicted RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 DOK6Q6PKX4 331 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 ZNF551Q7Z340 670 aaPredicted RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 CALHM3Q86XJ0 350 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 UMODL1-AS1Q8N2C9 162 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 OR4F6Q8NGB9 312 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 ST8SIA2Q92186 375 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 HHIPL1Q96JK4 782 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 SLC25A51Q9H1U9 297 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 MGAT4AQ9UM21 535 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 COMMD10Q9Y6G5 202 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 LOC102723532A0A0G2JNH3 316 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 OR6C75A6NL08 312 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 HOXD4P09016 255 aaPredicted RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 ARSBP15848 533 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 APEX1P27695 318 aaKnown RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 GZMMP51124 257 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 FGFBP1Q14512 234 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 SPOUT1Q5T280 376 aaKnown RBP16.15■□□□□ 0.18
PMS1-213ENST00000441310 TRIQKQ629K1 86 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 AFMIDQ63HM1 303 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 MRNIPQ6NTE8 343 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 SLC34A3Q8N130 599 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 FBXO22Q8NEZ5 403 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 OR6C4Q8NGE1 309 aa16.15■□□□□ 0.18
PMS1-213ENST00000441310 PXYLP1Q8TE99 480 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms