RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FIBINQ8TAL6 211 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 C11orf45Q8TAV5 145 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 GTF3AQ92664 365 aaKnown RBP4.11□□□□□ -1.75
PFDN4-202ENST00000441080 AGAP4Q96P64 663 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 PCDHB18PQ96TA0 734 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 VGLL1Q99990 258 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 CABLES2Q9BTV7 478 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 IDI2Q9BXS1 227 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 SLC39A8Q9C0K1 460 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 ABCB8Q9NUT2 735 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 BAIAP2L1Q9UHR4 511 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 LIPT1Q9Y234 373 aa4.11□□□□□ -1.75
PFDN4-202ENST00000441080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 A0A1B0GU03 582 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 ZNF732B4DXR9 585 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 TFECO14948 347 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 TLX2O43763 284 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 LRCH4O75427 683 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 CRCPO75575 148 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 GRAP2O75791 330 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 GIFP27352 417 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 GPR183P32249 361 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 SLC1A3P43003 542 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 KRT83P78385 493 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 ZNF177Q13360 481 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 NFATC2Q13469 925 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 MAPK11Q15759 364 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 KRTAP27-1Q3LI81 207 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 TAF1BQ53T94 588 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 SPANXN4Q5MJ08 99 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 ZNF772Q68DY9 489 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 METTL7BQ6UX53 244 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 C17orf107Q6ZR85 190 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 SIAH3Q8IW03 269 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 AQP12AQ8IXF9 295 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 CLYBLQ8N0X4 340 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 TMCO5AQ8N6Q1 288 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 Q8NBF4 154 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 ATP8B4Q8TF62 1192 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 SNRNP40Q96DI7 357 aaKnown RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 PRICKLE1Q96MT3 831 aaPredicted RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 LGMNQ99538 433 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 PKP2Q99959 881 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 GPATCH1Q9BRR8 931 aaKnown RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 CUEDC2Q9H467 287 aa4.1□□□□□ -1.75
PFDN4-202ENST00000441080 NOL7Q9UMY1 257 aaKnown RBP4.1□□□□□ -1.75
PFDN4-202ENST00000441080 ARID2Q68CP9 1835 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 IQCMA0A1B0GVH7 501 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 TCP10L2B9ZVM9 353 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 G3V2L1 256 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 SOCS3O14543 225 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 SIGLEC5O15389 551 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 AOC1P19801 751 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 FEN1P39748 380 aaKnown RBP4.09□□□□□ -1.75
PFDN4-202ENST00000441080 SNU13P55769 128 aaKnown RBP4.09□□□□□ -1.75
PFDN4-202ENST00000441080 FKBP1BP68106 108 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 ASIC1P78348 528 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 SLMAPQ14BN4 828 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 KBTBD12Q3ZCT8 623 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 LRRC38Q5VT99 294 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 GDPGP1Q6ZNW5 385 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 Q6ZVQ6 151 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 ZFAND4Q86XD8 727 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 DND1Q8IYX4 353 aaKnown RBP4.09□□□□□ -1.75
PFDN4-202ENST00000441080 PRSS33Q8NF86 280 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 OR9Q2Q8NGE9 314 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 OR10G7Q8NGN6 311 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 CDKN2AIPNLQ96HQ2 116 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 RASL10BQ96S79 203 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 RBM4BQ9BQ04 359 aaKnown RBP4.09□□□□□ -1.75
PFDN4-202ENST00000441080 ZNF559Q9BR84 538 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 DESI2Q9BSY9 194 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 PAPOLGQ9BWT3 736 aaKnown RBP4.09□□□□□ -1.75
PFDN4-202ENST00000441080 EGLN1Q9GZT9 426 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 ZNF350Q9GZX5 532 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 MRPL17Q9NRX2 175 aaKnown RBP4.09□□□□□ -1.75
PFDN4-202ENST00000441080 KLK11Q9UBX7 282 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 ITM2BQ9Y287 266 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 TMED7Q9Y3B3 224 aa4.09□□□□□ -1.75
PFDN4-202ENST00000441080 CCDC162PA2VCL2 907 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 ATP9AO75110 1047 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 NME6O75414 186 aaPredicted RBP4.08□□□□□ -1.76
PFDN4-202ENST00000441080 MTRF1O75570 445 aaKnown RBP4.08□□□□□ -1.76
PFDN4-202ENST00000441080 GLCEO94923 617 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 LETM1O95202 739 aaPredicted RBP4.08□□□□□ -1.76
PFDN4-202ENST00000441080 ACEP12821 1306 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 EDNRAP25101 427 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 ARHGAP1Q07960 439 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 CNTN1Q12860 1018 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 ACKR1Q16570 336 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 ZNF789Q5FWF6 425 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 SIGLEC15Q6ZMC9 328 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 C3P1Q6ZMU1 363 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 SPATA31D1Q6ZQQ2 1576 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 CCDC83Q8IWF9 413 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 KLHDC8AQ8IYD2 350 aa4.08□□□□□ -1.76
PFDN4-202ENST00000441080 RNF149Q8NC42 400 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms