RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RNH1P13489 461 aaKnown RBP18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 ZNF10P21506 573 aaPredicted RBP18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 HPDP32754 393 aaPredicted RBP18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 HSPA7P48741 367 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 RHAGQ02094 409 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 FBXO48Q5FWF7 155 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 ZDHHC24Q6UX98 284 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 CYS1Q717R9 158 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 ST6GALNAC3Q8NDV1 305 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 ARMC2Q8NEN0 867 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 MRRFQ96E11 262 aaKnown RBP18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 STMN3Q9NZ72 180 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 GPRC5BQ9NZH0 403 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 OR5H15A6NDH6 313 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 ANKDD1BA6NHY2 528 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 SUPT3HB4E1H0 165 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 CCNT2O60583 730 aaKnown RBP18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 PRMT3O60678 531 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 SUPT3HO75486 399 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 STK16O75716 305 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 FAM155BO75949 473 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 GSTM2P28161 218 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 EFTUD2Q15029 972 aaKnown RBP eCLIP18.68■□□□□ 0.582e-7■■■□□ 18
SHROOM1-204ENST00000440118 OR4D1Q15615 310 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 TRADDQ15628 312 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 ZKSCAN8Q15776 578 aaPredicted RBP18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 UAP1Q16222 522 aaPredicted RBP18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 INAQ16352 499 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 PDK4Q16654 411 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 XKR6Q5GH73 641 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 FCRLBQ6BAA4 426 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 SLCO4C1Q6ZQN7 724 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 ZNF572Q7Z3I7 529 aaPredicted RBP18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 CMC1Q7Z7K0 106 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 SLC5A8Q8N695 610 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 PLPP5Q8NEB5 264 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 FAR1Q8WVX9 515 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 HAS2Q92819 552 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 GAL3ST3Q96A11 431 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 ZNF354BQ96LW1 612 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 C5orf34Q96MH7 638 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 PTCHD1Q96NR3 888 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 TMEM79Q9BSE2 394 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 RNF32Q9H0A6 362 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 KLHL31Q9H511 634 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 ALG9Q9H6U8 611 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 COPS7BQ9H9Q2 264 aaPredicted RBP18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 LANCL2Q9NS86 450 aa18.68■□□□□ 0.58
SHROOM1-204ENST00000440118 ERI3O43414 337 aaKnown RBP18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 WISP3O95389 354 aaPredicted RBP18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 EDN3P14138 238 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 CRABP2P29373 138 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 PHBP35232 272 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 BTN3A2P78410 334 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 WHAMMP3Q1A5X7 153 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 PAGE2BQ5JRK9 111 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 CDKL4Q5MAI5 379 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 RPUSD3Q6P087 351 aaKnown RBP18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 CEP128Q6ZU80 1094 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 KLHDC8AQ8IYD2 350 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 STAG3L4Q8TBR4 150 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 M1APQ8TC57 530 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 KIAA1191Q96A73 305 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 ESAMQ96AP7 390 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 PSMG3-AS1Q96PY0 264 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 CLK4Q9HAZ1 481 aaKnown RBP18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 NMRAL1Q9HBL8 299 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 NUDT4Q9NZJ9 180 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 MTRF1LQ9UGC7 380 aaKnown RBP18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 SLC5A6Q9Y289 635 aa18.67■□□□□ 0.58
SHROOM1-204ENST00000440118 DIDO1Q9BTC0 2240 aaKnown RBP18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 A0A0G2JN53 185 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 CTAGE15A4D2H0 777 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 DDAH2O95865 285 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 TFEBP19484 476 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 GUCY2DQ02846 1103 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 TGM3Q08188 693 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 HIST2H2ACQ16777 129 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 MEP1AQ16819 746 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 ACER2Q5QJU3 275 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 HIST2H2AA3Q6FI13 130 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 TRIM40Q6P9F5 258 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 QSOX2Q6ZRP7 698 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 LRRC70Q7Z2Q7 622 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 CTAGE6Q86UF2 777 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 BEST3Q8N1M1 668 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 AMER2Q8N7J2 671 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 PDPRQ8NCN5 879 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 CREB3L4Q8TEY5 395 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 SEC16BQ96JE7 1060 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 BARD1Q99728 777 aaKnown RBP18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 LRRC1Q9BTT6 524 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 EFCAB11Q9BUY7 163 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 PITHD1Q9GZP4 211 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 EHD1Q9H4M9 534 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 MMP25Q9NPA2 562 aa18.66■□□□□ 0.58
SHROOM1-204ENST00000440118 A1L4Q6 167 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 TAPBPO15533 448 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 B3GALT2O43825 422 aa18.65■□□□□ 0.58
SHROOM1-204ENST00000440118 PRAMEF2O60811 474 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms