RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 A0A0G2JN53 185 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 ERI3O43414 337 aaKnown RBP22.65■■□□□ 1.22
CPNE1-217ENST00000439669 CLEC3AO75596 197 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 SORBS2O94875 1100 aaKnown RBP22.65■■□□□ 1.22
CPNE1-217ENST00000439669 FHP07954 510 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 FAM153BP0C7A2 387 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 PRR35P0CG20 571 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 SMIM10L1P0DMW3 83 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 JAK1P23458 1154 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 HNRNPH1P31943 449 aaKnown RBP22.65■■□□□ 1.22
CPNE1-217ENST00000439669 MAGEA12P43365 314 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 BTN3A2P78410 334 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 FOXK1P85037 733 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 SETDB1Q15047 1291 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 FAM153CQ494X1 144 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 TECRLQ5HYJ1 363 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 ADNP2Q6IQ32 1131 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 IGFL3Q6UXB1 125 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 CPEB2Q7Z5Q1 589 aaKnown RBP22.65■■□□□ 1.22
CPNE1-217ENST00000439669 PLD6Q8N2A8 252 aaKnown RBP22.65■■□□□ 1.22
CPNE1-217ENST00000439669 TEX9Q8N6V9 391 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 SMIM10Q96HG1 83 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 FAR2Q96K12 515 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 SCYL1Q96KG9 808 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 GPR78Q96P69 363 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 RHBGQ9H310 441 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 EPS8L2Q9H6S3 715 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 LANCL2Q9NS86 450 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 PLAAQ9Y263 795 aa22.65■■□□□ 1.22
CPNE1-217ENST00000439669 PSMD12O00232 456 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 RIPK2O43353 540 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 B4GALT2O60909 372 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 SEC24DO94855 1032 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 SERPINA7P05543 415 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 CELA2AP08217 269 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 EPB42P16452 691 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 HPDP32754 393 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ALDH18A1P54886 795 aaKnown RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 RHAGQ02094 409 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ABRAXAS2Q15018 415 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 NSDHLQ15738 373 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 TBCCQ15814 346 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ISLR2Q6UXK2 745 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 LINC00696Q6ZRV3 163 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 VN1R5Q7Z5H4 357 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ANKRD37Q7Z713 158 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 EFCAB3Q8N7B9 438 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 BRIX1Q8TDN6 353 aaKnown RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 MS4A6EQ96DS6 147 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 TUBB6Q9BUF5 446 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ILKAPQ9H0C8 392 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 CLMPQ9H6B4 373 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 L2HGDHQ9H9P8 463 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 CLK4Q9HAZ1 481 aaKnown RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ZNF358Q9NW07 568 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 ZNF490Q9ULM2 529 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-217ENST00000439669 B3GNT3Q9Y2A9 372 aa22.64■■□□□ 1.21
CPNE1-217ENST00000439669 HELZ2Q9BYK8 2649 aaKnown RBP22.63■■□□□ 1.21
CPNE1-217ENST00000439669 LRIT2A6NDA9 550 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 SNRPAP09012 282 aaKnown RBP22.63■■□□□ 1.21
CPNE1-217ENST00000439669 RNH1P13489 461 aaKnown RBP22.63■■□□□ 1.21
CPNE1-217ENST00000439669 NAA30Q147X3 362 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-217ENST00000439669 TSNAXIP1Q2TAA8 658 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 LGSNQ5TDP6 509 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 TRIM40Q6P9F5 258 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 Q8NA96 180 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 CPT1CQ8TCG5 803 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 TSLPQ969D9 159 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 UBE2E3Q969T4 207 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 REXO4Q9GZR2 422 aaKnown RBP22.63■■□□□ 1.21
CPNE1-217ENST00000439669 PTGFRNQ9P2B2 879 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 MAP10Q9P2G4 905 aa22.63■■□□□ 1.21
CPNE1-217ENST00000439669 A0A088AWK7 358 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 MAGEB17A8MXT2 336 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 WFS1O76024 890 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 ZIC2O95409 532 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-217ENST00000439669 RBP1P09455 135 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 PCNAP12004 261 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 ICAM2P13598 275 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 ZNF10P21506 573 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-217ENST00000439669 CASP2P42575 452 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 PLA2G16P53816 162 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 AP2B1P63010 937 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 CRB2Q5IJ48 1285 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 MED27Q6P2C8 311 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 RIPOR1Q6ZS17 1223 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 MYLK4Q86YV6 388 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-217ENST00000439669 CA13Q8N1Q1 262 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 SIRT6Q8N6T7 355 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 PLPP5Q8NEB5 264 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 MIB2Q96AX9 1013 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 IMMP1LQ96LU5 166 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 WDR77Q9BQA1 342 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-217ENST00000439669 XPR1Q9UBH6 696 aa22.62■■□□□ 1.21
CPNE1-217ENST00000439669 GCN1Q92616 2671 aaKnown RBP22.62■■□□□ 1.21
CPNE1-217ENST00000439669 LRRC14BA6NHZ5 514 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 KLK8O60259 260 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 ITGAMP11215 1152 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 ACTN3Q08043 901 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-217ENST00000439669 TGM3Q08188 693 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms