RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 TPGS1Q6ZTW0 290 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 SNX20Q7Z614 316 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 CIR1Q86X95 450 aaPredicted RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 GRIN3AQ8TCU5 1115 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 CDKN2AIPNLQ96HQ2 116 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 SMOQ99835 787 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 FUNDC2Q9BWH2 189 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 ZFP57Q9NU63 452 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 OLAHQ9NV23 265 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 TMEM45AQ9NWC5 275 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 MCUBQ9NWR8 336 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 GTF2IRD1Q9UHL9 959 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 NUP50Q9UKX7 468 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 RNF11Q9Y3C5 154 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 UGT2A1Q9Y4X1 527 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 GOLGA4Q13439 2230 aaKnown RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 A8MVJ9 347 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 J3KR12 359 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 USP2O75604 605 aaPredicted RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 AP2A2O94973 939 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 GADD45GO95257 159 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 PRAMEF1O95521 474 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 C9P02748 559 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 PRKCGP05129 697 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 TACSTD2P09758 323 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 SLC35G6P0C7Q6 338 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 G6PDP11413 515 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 CAPN3P20807 821 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 CD72P21854 359 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 AZGP1P25311 298 aaKnown RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 HTR1EP28566 365 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 ZNF280AP59817 542 aaPredicted RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 ABATP80404 500 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 ABHD18Q0P651 414 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 ZBTB6Q15916 424 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 GPR153Q6NV75 609 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 RNF44Q7L0R7 432 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 MFSD2AQ8NA29 543 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 ABHD11Q8NFV4 315 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 OR10Q1Q8NGQ4 319 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 SNX33Q8WV41 574 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 GEMIN6Q8WXD5 167 aaKnown RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 KIAA1191Q96A73 305 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 SLC22A18Q96BI1 424 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 ART5Q96L15 291 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 FKBPLQ9UIM3 349 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 PCDHGC4Q9Y5F7 938 aa6.17□□□□□ -1.42
BDNF-211ENST00000439476 OAS3Q9Y6K5 1087 aaKnown RBP6.17□□□□□ -1.42
BDNF-211ENST00000439476 SLC9B1P1A6NJY1 282 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 ACOT8O14734 319 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 AURKAO14965 403 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TLX3O43711 291 aaPredicted RBP6.16□□□□□ -1.42
BDNF-211ENST00000439476 DUSP11O75319 330 aaKnown RBP6.16□□□□□ -1.42
BDNF-211ENST00000439476 UBXN7O94888 489 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 GLUD1P00367 558 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 EPOP01588 193 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PROS1P07225 676 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 YES1P07947 543 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 DDX6P26196 483 aaKnown RBP eCLIP6.16□□□□□ -1.42
BDNF-211ENST00000439476 OR4D2P58180 307 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 SH3BP2P78314 561 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 HMGCS1Q01581 520 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 IFITM2Q01629 132 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 CHIT1Q13231 466 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PTPRCAPQ14761 206 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 C6orf136Q5SQH8 315 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TMEM236Q5W0B7 351 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 FAM180AQ6UWF9 173 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 MBOAT1Q6ZNC8 495 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 USP30Q70CQ3 517 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 DEFB128Q7Z7B8 93 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TMPRSS11BQ86T26 416 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 SCML4Q8N228 414 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 POC1BQ8TC44 478 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TNFAIP8L1Q8WVP5 186 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 ZNF354BQ96LW1 612 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TMEM68Q96MH6 324 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TEPSINQ96N21 525 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 BCL7BQ9BQE9 202 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TMEM246Q9BRR3 403 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 LHPPQ9H008 270 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 POLE4Q9NR33 117 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 FAM120CQ9NX05 1096 aaKnown RBP6.16□□□□□ -1.42
BDNF-211ENST00000439476 ATXN7L1Q9ULK2 861 aaPredicted RBP6.16□□□□□ -1.42
BDNF-211ENST00000439476 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PMF1-BGLAPU3KQ54 211 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 COL2A1P02458 1487 aaPredicted RBP6.16□□□□□ -1.42
BDNF-211ENST00000439476 HMX3A6NHT5 357 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 LINC00587B1AMM8 73 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PLOD2O00469 737 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PIRO00625 290 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 TOR1AO14656 332 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PRODHO43272 600 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 ARL6IP5O75915 188 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 RECKO95980 971 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 DNTTP04053 509 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 IQCF3P0C7M6 154 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 FPR1P21462 350 aa6.16□□□□□ -1.42
BDNF-211ENST00000439476 PRMT2P55345 433 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms