RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CDADC1Q9BWV3 514 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 C1QTNF6Q9BXI9 259 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CD244Q9BZW8 370 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 FNIP2Q9P278 1114 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NLKQ9UBE8 527 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CLEC2DQ9UHP7 191 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 B3GNT3Q9Y2A9 372 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 DNAH14Q0VDD8 3507 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 MEIOCA2RUB1 952 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TNFRSF11BO00300 401 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CDRT1O95170 752 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CD160O95971 181 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 C9P02748 559 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CR2P20023 1033 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ENDOUP21128 410 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CCR7P32248 378 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 WASP42768 502 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 BDKRB1P46663 353 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CCT3P49368 545 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PRIM2P49643 509 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 HNRNPFP52597 415 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TOP3AQ13472 1001 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC14A2Q15849 920 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 HKDC1Q2TB90 917 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ARSIQ5FYB1 569 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 GPRC6AQ5T6X5 926 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF544Q6NX49 715 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CRTC1Q6UUV9 634 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PTCHD4Q6ZW05 846 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMPRSS11BQ86T26 416 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NXPE1Q8N323 547 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 IQCF1Q8N6M8 205 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 OR2AP1Q8NGE2 309 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PIGKQ92643 395 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMEM159Q96B96 161 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NACC2Q96BF6 587 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 RHBDF1Q96CC6 855 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 MSANTD3Q96H12 275 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC30A2Q9BRI3 323 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ASPNQ9BXN1 380 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SUV39H2Q9H5I1 410 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF224Q9NZL3 707 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PCDHB1Q9Y5F3 818 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TRAV6A0A075B6T7 132 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CLIC1O00299 241 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 BTN3A3O00478 584 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NCR1O76036 304 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 MATN4O95460 622 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 IGLV3-27P01718 113 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CSF2RAP15509 400 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SSTR2P30874 369 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CSRP3P50461 194 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 RNF144AP50876 292 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 MRPL58Q14197 206 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZSWIM7Q19AV6 140 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 INO80DQ53TQ3 878 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 Q5BKY6 102 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 KIAA1614Q5VZ46 1190 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CERS6Q6ZMG9 384 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CCDC71Q8IV32 467 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SYT14Q8NB59 555 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NLGN4YQ8NFZ3 816 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 PIH1D2Q8WWB5 315 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TCEAL4Q96EI5 215 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SIPA1Q96FS4 1042 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 WACQ9BTA9 647 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZSCAN5AQ9BUG6 496 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 RIOK2Q9BVS4 552 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 VN1R3Q9BXE9 311 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 KLF16Q9BXK1 252 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 NUSAP1Q9BXS6 441 aaKnown RBP9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 HDHD2Q9H0R4 259 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 CERS4Q9HA82 394 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZNF556Q9HAH1 456 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 TMEM184CQ9NVA4 438 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 SLC25A13Q9UJS0 675 aa9.57□□□□□ -0.88
CDC42SE1-202ENST00000439374 A0A0G2JMZ2 1700 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 LOC285556D6RIA3 1793 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 CIB4A0PJX0 185 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 PIPSLA2A3N6 862 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 HLA-EP13747 358 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 RPS3P23396 243 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 PPM1FP49593 454 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 POU6F2P78424 691 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 BCL2A1Q16548 175 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 NDUFA5Q16718 116 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 C22orf42Q6IC83 251 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 KRT74Q7RTS7 529 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 MSRB3Q8IXL7 192 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 ENTHD1Q8IYW4 607 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 ARMC5Q96C12 935 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 TTTY10Q9BZA0 68 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 ZIM2Q9NZV7 527 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 CXXC1Q9P0U4 656 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 DSCR3O14972 297 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 PDE9AO76083 593 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 TGFB1P01137 390 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 KIR3DL1P43629 444 aa9.56□□□□□ -0.88
CDC42SE1-202ENST00000439374 GNG2P59768 71 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms