RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 HPRP00739 348 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF24P17028 368 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 JUNBP17275 347 aaPredicted RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 STARD3Q14849 445 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 WSCD2Q2TBF2 565 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 SDE2Q6IQ49 451 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 LAIR2Q6ISS4 152 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 PNCKQ6P2M8 343 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 VTCN1Q7Z7D3 282 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 HOMEZQ8IX15 550 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 SYTL1Q8IYJ3 562 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 CFAP206Q8IYR0 622 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 SVOPLQ8N434 492 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF555Q8NEP9 628 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 HUS1BQ8NHY5 278 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 ATL1Q8WXF7 558 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF347Q96SE7 839 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 BARD1Q99728 777 aaKnown RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 GABRG3Q99928 467 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 RMI1Q9H9A7 625 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 PRR23AA6NEV1 266 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 NPIPB8E9PQR5 432 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 GBAP04062 536 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 RGS19P49795 217 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 IL1RL1Q01638 556 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 SRSF11Q05519 484 aaKnown RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 ADAMTSL4Q6UY14 1074 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 GALNT5Q7Z7M9 940 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 OR7G3Q8NG95 312 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 FOPNLQ96NB1 174 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 MROQ9BYG7 248 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 MAGIXQ9H6Y5 334 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 PAK1IP1Q9NWT1 392 aaPredicted RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 FBXL12Q9NXK8 326 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 POU2F3Q9UKI9 436 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 SH2B3Q9UQQ2 575 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 RUVBL1Q9Y265 456 aaKnown RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 PRKAB1Q9Y478 270 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 PCYT1BQ9Y5K3 369 aaPredicted RBP13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 GNG14A0A1W2PPG7 69 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 MYO1GB0I1T2 1018 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CLDN25C9JDP6 229 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 KDM1AO60341 852 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 MITFO75030 526 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CCNDBP1O95273 360 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 KCNK5O95279 499 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ANXA4P09525 319 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 HOXB2P14652 356 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 COL9A1P20849 921 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 MAPK11Q15759 364 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CCDC92Q53HC0 331 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CATSPEREQ5SY80 951 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 IER5LQ5T953 404 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 TTC23Q5W5X9 447 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 OR5K1Q8NHB7 308 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 KLK6Q92876 244 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 COX14Q96I36 57 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 FCRL1Q96LA6 429 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CCDC90BQ9GZT6 254 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 VPS4AQ9UN37 437 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 A0A1W2PQF6 199 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 GABRR3A8MPY1 467 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 H0YIV9 168 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 SAP18O00422 153 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 VEGFDO43915 354 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 POP7O75817 140 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 NTRK1P04629 796 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ABCB1P08183 1280 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 NUDT7P0C024 238 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ACPPP15309 386 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 TGFBR1P36897 503 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 HNF4AP41235 474 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CASP9P55211 416 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 GP2P55259 537 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 RPS13P62277 151 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 TBPL1P62380 186 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 RAE1P78406 368 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CDK3Q00526 305 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CTF1Q16619 201 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 VMACQ2NL98 169 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 C6orf183Q5T699 404 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 UTS2BQ765I0 119 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ZZZ3Q8IYH5 903 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ARL10Q8N8L6 244 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 PJA1Q8NG27 643 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF480Q8WV37 535 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF514Q96K75 400 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 CNDP2Q96KP4 475 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 MAGEB10Q96LZ2 347 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 DUSP26Q9BV47 211 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 LGR4Q9BXB1 951 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 YTHDF1Q9BYJ9 559 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 SIAEQ9HAT2 523 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms