RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SETDB1Q15047 1291 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 PCOLCEQ15113 449 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 PFKFB4Q16877 469 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 SLC6A19Q695T7 634 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 GPR78Q96P69 363 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 MFRPQ9BY79 579 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 KLHL31Q9H511 634 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 EPS8L2Q9H6S3 715 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 TNPO3Q9Y5L0 923 aaKnown RBP23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 TRIM49D1C9J1S8 452 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PYCARD-AS1I3L0S3 204 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PSMD12O00232 456 aaPredicted RBP23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 KLK8O60259 260 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PRAMEF4O60810 478 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 SORBS2O94875 1100 aaKnown RBP23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PRR35P0CG20 571 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 EPORP19235 508 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 EFNA3P52797 238 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 OLR1P78380 273 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PCDH1Q08174 1060 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 E2F2Q14209 437 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 NAA30Q147X3 362 aaPredicted RBP23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 TECRLQ5HYJ1 363 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PRAMEF9Q5VWM5 478 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 METTL2BQ6P1Q9 378 aaKnown RBP23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 CPEB2Q7Z5Q1 589 aaKnown RBP23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 PLPP5Q8NEB5 264 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 MTBPQ96DY7 904 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 RBCK1Q9BYM8 510 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 REXO4Q9GZR2 422 aaKnown RBP23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 RHBGQ9H310 441 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 LANCL2Q9NS86 450 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 TMCO1Q9UM00 188 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 B3GNT3Q9Y2A9 372 aa23.32■■□□□ 1.32
RAPGEF1-206ENST00000438647 ERI3O43414 337 aaKnown RBP23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 CDC123O75794 336 aaPredicted RBP23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 WFS1O76024 890 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 B3GALT4O96024 378 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 RNH1P13489 461 aaKnown RBP23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 PIK3CGP48736 1102 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 MLLT10P55197 1068 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 FOXK1P85037 733 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 TGM3Q08188 693 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 ABRAXAS2Q15018 415 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 NSDHLQ15738 373 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 TRIM40Q6P9F5 258 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 IGFL2Q6UWQ7 119 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 ISLR2Q6UXK2 745 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 PLD6Q8N2A8 252 aaKnown RBP23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 TEX9Q8N6V9 391 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 OR2L5Q8NG80 312 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 MS4A6EQ96DS6 147 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 PRM3Q9NNZ6 103 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 CPSF2Q9P2I0 782 aaKnown RBP23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 ZNF490Q9ULM2 529 aaPredicted RBP23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 DOCK10Q96BY6 2186 aa23.31■■□□□ 1.32
RAPGEF1-206ENST00000438647 MAGEB17A8MXT2 336 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 UQCRHP07919 91 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 CD22P20273 847 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 SERPINB1P30740 379 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 HNRNPH1P31943 449 aaKnown RBP23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 BTN3A2P78410 334 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 RHAGQ02094 409 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 PCBP2Q15366 365 aaKnown RBP eCLIP23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 ADPRMQ3LIE5 342 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 CRB2Q5IJ48 1285 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 TEX35Q5T0J7 233 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 MED27Q6P2C8 311 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 LANCL3Q6ZV70 420 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 ANKRD37Q7Z713 158 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 SHISA5Q8N114 240 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 EFCAB3Q8N7B9 438 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 LRRN4CLQ8ND94 238 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 PPP4R1Q8TF05 950 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 SCYL1Q96KG9 808 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 LMF1Q96S06 567 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 NPLQ9BXD5 320 aaPredicted RBP23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 AICDAQ9GZX7 198 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 CLMPQ9H6B4 373 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 FETUBQ9UGM5 382 aa23.3■■□□□ 1.32
RAPGEF1-206ENST00000438647 FAM153BP0C7A2 387 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 FAM153CQ494X1 144 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 ADGRD1Q6QNK2 874 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 QSOX2Q6ZRP7 698 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 VN1R5Q7Z5H4 357 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 LAS2Q8IYD9 372 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 SRFBP1Q8NEF9 429 aaKnown RBP23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 CPT1CQ8TCG5 803 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 IMMP1LQ96LU5 166 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 WDR77Q9BQA1 342 aaPredicted RBP23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 TXLNGYQ9BZA5 131 aa23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 ILKAPQ9H0C8 392 aaPredicted RBP23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 ZBTB20Q9HC78 741 aaPredicted RBP23.29■■□□□ 1.32
RAPGEF1-206ENST00000438647 OR2W5A6NFC9 320 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 C4orf51C9J302 202 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 B3GALT2O43825 422 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 B4GALT2O60909 372 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 SMIM24O75264 130 aa23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 SEC24DO94855 1032 aaPredicted RBP23.28■■□□□ 1.32
RAPGEF1-206ENST00000438647 CD97P48960 835 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms