RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 USP43Q70EL4 1123 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 SYN2Q92777 582 aaPredicted RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 UCN3Q969E3 161 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 ADAD1Q96M93 576 aaKnown RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 JMJD8Q96S16 334 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 SLC30A3Q99726 388 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 TM9SF2Q99805 663 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 OPN3Q9H1Y3 402 aaPredicted RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 ADAM22Q9P0K1 906 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 IKZF3Q9UKT9 509 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 RNF115Q9Y4L5 304 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 SCN3AQ9NY46 2000 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 A0A1W2PNV4 684 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 TCRBV5S1A1TA0A578 114 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 A8MUA0 341 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 SGK494L7N484 410 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 NDST3O95803 873 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 IL1RNP18510 177 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 SYT1P21579 422 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 PON1P27169 355 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 PTPRCAPQ14761 206 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 NDUFA9Q16795 377 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 COBLL1Q53SF7 1204 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 VWA1Q6PCB0 445 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 GBP6Q6ZN66 633 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 GLT6D1Q7Z4J2 308 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 WFDC8Q8IUA0 241 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 LRRC49Q8IUZ0 686 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 LRRC25Q8N386 305 aaPredicted RBP10.09□□□□□ -0.79
RTN4-211ENST00000438462 GOLM1Q8NBJ4 401 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 OR6P1Q8NGX9 317 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 RERGQ96A58 199 aaPredicted RBP10.09□□□□□ -0.79
RTN4-211ENST00000438462 WDYHV1Q96HA8 205 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 PEX11GQ96HA9 241 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 WWC2-AS2Q96NR7 200 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 GSDMAQ96QA5 445 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 RASL10BQ96S79 203 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 QPCTLQ9NXS2 382 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 ELOVL5Q9NYP7 299 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 CRLS1Q9UJA2 301 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 BOKQ9UMX3 212 aaPredicted RBP10.09□□□□□ -0.79
RTN4-211ENST00000438462 MAPRE3Q9UPY8 281 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 SH2B3Q9UQQ2 575 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 SLC6A5Q9Y345 797 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 PKP3Q9Y446 797 aa10.09□□□□□ -0.79
RTN4-211ENST00000438462 IGHV4-61A0A0C4DH41 118 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 SLC5A10A0PJK1 596 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 LIN7AO14910 233 aaPredicted RBP10.08□□□□□ -0.8
RTN4-211ENST00000438462 COL6A2P12110 1019 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 PTNP21246 168 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 GDF1P27539 372 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 IL1R2P27930 398 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 SCGB2A2Q13296 93 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 GRB7Q14451 532 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 NAA25Q14CX7 972 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 EXOC3L4Q17RC7 722 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 MCOLN3Q8TDD5 553 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 SREK1Q8WXA9 508 aaKnown RBP10.08□□□□□ -0.8
RTN4-211ENST00000438462 HSPH1Q92598 858 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 SLC39A3Q9BRY0 314 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 DPH7Q9BTV6 452 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 CACNG6Q9BXT2 260 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 KLHL4Q9C0H6 718 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 TRABDQ9H4I3 376 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 ZFP64Q9NPA5 681 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 ADAP2Q9NPF8 381 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 SAMD15Q9P1V8 674 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 DTX4Q9Y2E6 619 aa10.08□□□□□ -0.8
RTN4-211ENST00000438462 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 RDH16O75452 317 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 SRP72O76094 671 aaKnown RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 CYP4B1P13584 511 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 CCNCP24863 283 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 PSMA2P25787 234 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 MIPP30301 263 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 BCL6P41182 706 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 NSFP46459 744 aaKnown RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 FMO1Q01740 532 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 KIF5AQ12840 1032 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 GAB1Q13480 694 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 ZNF672Q499Z4 452 aaPredicted RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 ZNF658Q5TYW1 1059 aaPredicted RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 CCDC70Q6NSX1 233 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 DCUN1D2Q6PH85 259 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 DTX2Q86UW9 622 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 PSTKQ8IV42 348 aaKnown RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 CNTD1Q8N815 330 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 B3GNT7Q8NFL0 401 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 FATE1Q969F0 183 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 STARD4Q96DR4 205 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 JSRP1Q96MG2 331 aaPredicted RBP10.07□□□□□ -0.8
RTN4-211ENST00000438462 OR2A5Q96R48 311 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 KRT12Q99456 494 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 COPS8Q99627 209 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 TUBA1CQ9BQE3 449 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 FICDQ9BVA6 458 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 UGT2B28Q9BY64 529 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms