RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SF1Q15637 639 aaKnown RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM44Q2T9K0 475 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 CLLU1OSQ5K130 101 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 KREMEN2Q8NCW0 462 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 DENND6BQ8NEG7 585 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SLC5A11Q8WWX8 675 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 KCNN2Q9H2S1 579 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 RDH14Q9HBH5 336 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 NEK6Q9HC98 313 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 NEUROD4Q9HD90 331 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 MRPL39Q9NYK5 338 aaKnown RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 GPR83Q9NYM4 423 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 AASSQ9UDR5 926 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 GPSM3Q9Y4H4 160 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 A0A0G2JN53 185 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 BTN3A3O00478 584 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 INPPL1O15357 1258 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 TSPAN6O43657 245 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 IGLV3-25P01717 112 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SLC2A2P11168 524 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 LAMP2P13473 410 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 ETFAP13804 333 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 CD1EP15812 388 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 GSTM3P21266 225 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SMSP52788 366 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 NDUFA9Q16795 377 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 XKR7Q5GH72 579 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 CPZQ66K79 652 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 TBPL2Q6SJ96 375 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 AMZ2Q86W34 360 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 GALNT12Q8IXK2 581 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 APCDD1Q8J025 514 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 LINC00471Q8N535 108 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 FAM110BQ8TC76 370 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SLC9A6Q92581 669 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 MAL2Q969L2 176 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 MED28Q9H204 178 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 C14orf119Q9NWQ9 140 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 GABRQQ9UN88 632 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 IGLV3-10A0A075B6K4 115 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 URADA6NGE7 173 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SCAMP2O15127 329 aaKnown RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 DYRK3O43781 588 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 POP7O75817 140 aaKnown RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 LATS1O95835 1130 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 PTTG1O95997 202 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 CKMT1AP12532 417 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 PFKLP17858 780 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 FUT4P22083 530 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SCN1AP35498 2009 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 CRISP1P54107 249 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 FBXW4P57775 412 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 ACVR1Q04771 509 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM115Q12893 351 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 E2F2Q14209 437 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 THOC7Q6I9Y2 204 aaKnown RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 NADSYN1Q6IA69 706 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SUSD1Q6UWL2 747 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF438Q7Z4V0 828 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 CBARPQ8N350 705 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 KLHDC9Q8NEP7 349 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 OR6Q1Q8NGQ2 317 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 RAB8BQ92930 207 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 SCRN2Q96FV2 425 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 EGLN2Q96KS0 407 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 PHPT1Q9NRX4 125 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-205ENST00000438362 PHF11Q9UIL8 331 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 FBXW2Q9UKT8 454 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 PCDHGA10Q9Y5H3 936 aa6.44□□□□□ -1.38
CSDE1-205ENST00000438362 DLGAP1O14490 977 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR7A17O14581 309 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 UPK1BO75841 260 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 MMP2P08253 660 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SAGP10523 405 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CCR8P51685 355 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CD83Q01151 205 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SPHARQ15513 63 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 TCEA2Q15560 299 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 NDUFAF6Q330K2 333 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF311Q5JNZ3 666 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 PNCKQ6P2M8 343 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 B3GNT8Q7Z7M8 397 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 IZUMO1Q8IYV9 350 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR9A1PQ8NGU1 263 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 HUS1BQ8NHY5 278 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CD99L2Q8TCZ2 262 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CYB5D2Q8WUJ1 264 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 IGSF21Q96ID5 467 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 FRMD6Q96NE9 622 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 DEFB118Q96PH6 123 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 BARD1Q99728 777 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CPPED1Q9BRF8 314 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ELAC1Q9H777 363 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ACOT13Q9NPJ3 140 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SACM1LQ9NTJ5 587 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 CDH7Q9ULB5 785 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ERVK-11Q9UQG0 969 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 FAM92AA1XBS5 289 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 OR6C70A6NIJ9 312 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ARHGEF33A8MVX0 844 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms