RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RPS6KA6Q9UK32 745 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ACSL6Q9UKU0 697 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 PRAMEF25A6NGN4 478 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 H0YIV9 168 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 KMOO15229 486 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ACRP10323 421 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 LAG3P18627 525 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 RRM2P31350 389 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ARHGDIAP52565 204 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ITGA1P56199 1179 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 CAMK2GQ13555 558 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 RGNQ15493 299 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 INAVAQ3KP66 663 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 CPTPQ5TA50 214 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 ANGPTL8Q6UXH0 198 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 AHSA2Q719I0 299 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 TMPRSS11BQ86T26 416 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 KREMEN2Q8NCW0 462 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 DNASE1L2Q92874 299 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 IRF7Q92985 503 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 YIPF6Q96EC8 236 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 KCNC2Q96PR1 638 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 EMILIN2Q9BXX0 1053 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 REEP1Q9H902 201 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 PAK6Q9NQU5 681 aaPredicted RBP10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 KIF17Q9P2E2 1029 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 REV3LO60673 3130 aa10.01□□□□□ -0.81
CLSTN1-203ENST00000435891 HELZP42694 1942 aaKnown RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 GNG14A0A1W2PPG7 69 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 MOSPD3O75425 235 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ETFAP13804 333 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 MVDP53602 400 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 POLR2LP62875 67 aaKnown RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 HBA1P69905 142 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 NPRL3Q12980 569 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 SYTL3Q4VX76 610 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 SNAP47Q5SQN1 464 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 KIAA1614Q5VZ46 1190 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ZDHHC20Q5W0Z9 365 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 GRHL2Q6ISB3 625 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 FAHD1Q6P587 224 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ENTHD1Q8IYW4 607 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 SETD9Q8NE22 299 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 OR52J3Q8NH60 311 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 BTN2A2Q8WVV5 523 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 GLMNQ92990 594 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 TMEM159Q96B96 161 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 MRGPRX3Q96LB0 322 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 NRTNQ99748 197 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 BTBD2Q9BX70 525 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 SPNS1Q9H2V7 528 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ACOT13Q9NPJ3 140 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ASAH2Q9NR71 780 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 TBX21Q9UL17 535 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 TESMINQ9Y4I5 508 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 WNT6Q9Y6F9 365 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 A8MV72 311 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 CSF2RAP15509 400 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 C21orf33P30042 268 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 MESP2Q0VG99 397 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PRSS53Q2L4Q9 553 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM214AQ32MH5 1076 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PRSS36Q5K4E3 855 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 BRAT1Q6PJG6 821 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 NPAS3Q8IXF0 933 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PSD4Q8NDX1 1056 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 FLCNQ8NFG4 579 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 CHTF18Q8WVB6 975 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 CIDECQ96AQ7 238 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF300Q96RE9 604 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF347Q96SE7 839 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 WRAP53Q9BUR4 548 aaKnown RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 MROQ9BYG7 248 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 RNF208Q9H0X6 261 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 STMN3Q9NZ72 180 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PNMA8BQ9ULN7 279 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 ERVW-1Q9UQF0 538 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 UGT2A1Q9Y4X1 527 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PLXNA2O75051 1894 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 SLC5A10A0PJK1 596 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 HIDE1A8MVS5 230 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 WASH3PC4AMC7 463 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 K7ESM1 405 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 PRMT3O60678 531 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 UGDHO60701 494 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 FAM20BO75063 409 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 ZNF8P17098 575 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 RECQLP46063 649 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 GNG2P59768 71 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 WDR5P61964 334 aaKnown RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 NTHL1P78549 312 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 TMEM115Q12893 351 aaPredicted RBP10□□□□□ -0.81
CLSTN1-203ENST00000435891 ACOX1Q15067 660 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 MPEG1Q2M385 716 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 TMEM220Q6QAJ8 160 aa10□□□□□ -0.81
CLSTN1-203ENST00000435891 UBE2Q1Q7Z7E8 422 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms