RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 WISP3O95389 354 aaPredicted RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 SERPINA6P08185 405 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 RNH1P13489 461 aaKnown RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 PRF1P14222 555 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 SLC6A12P48065 614 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 TAS2R50P59544 299 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 RBBP5Q15291 538 aaKnown RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 TOR1AIP1Q5JTV8 583 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 ADAMTSL2Q86TH1 951 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 KLHDC8AQ8IYD2 350 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 CYP4X1Q8N118 509 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 SLC34A3Q8N130 599 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 NFAM1Q8NET5 270 aaPredicted RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 RHBDF1Q96CC6 855 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 CCDC120Q96HB5 630 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 FRMD6Q96NE9 622 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 PTCHD1Q96NR3 888 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 EGFL8Q99944 293 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 UNKQ9C0B0 810 aaKnown RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 TSPAN10Q9H1Z9 355 aaPredicted RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 CDCP1Q9H5V8 836 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 CLK4Q9HAZ1 481 aaKnown RBP13.46□□□□□ -0.25
LINC01006-204ENST00000435354 NECTIN3Q9NQS3 549 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 CTNNAL1Q9UBT7 734 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 SNX24Q9Y343 169 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 LRBAP50851 2863 aa13.46□□□□□ -0.25
LINC01006-204ENST00000435354 GTF3C1Q12789 2109 aa13.46□□□□□ -0.26
LINC01006-204ENST00000435354 NCOA6Q14686 2063 aaPredicted RBP13.46□□□□□ -0.26
LINC01006-204ENST00000435354 PKDREJQ9NTG1 2253 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 TCRBV16S1A1N1A0A5B0 115 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 ARHGAP10A1A4S6 786 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 SAGE2PA6NJ88 616 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 CXorf49A8MYA2 514 aaPredicted RBP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 NDC80O14777 642 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 SLC19A2O60779 497 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 SP1P08047 785 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 TPP2P29144 1249 aaPredicted RBP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 HNMTP50135 292 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 OC90Q02509 493 aaPredicted RBP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 RPS19BP1Q86WX3 136 aaKnown RBP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 ZBED8Q8IZ13 594 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 CA13Q8N1Q1 262 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 MARVELD3Q96A59 401 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 KRT12Q99456 494 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 RHBGQ9H310 441 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 CAB39LQ9H9S4 337 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 POPDC3Q9HBV1 291 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 GPAMQ9HCL2 828 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 PRDM9Q9NQV7 894 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 SH3BGRL2Q9UJC5 107 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 PYCARDQ9ULZ3 195 aa13.45□□□□□ -0.26
LINC01006-204ENST00000435354 MTO1Q9Y2Z2 717 aaKnown RBP13.45□□□□□ -0.26
LINC01006-204ENST00000435354 URADA6NGE7 173 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 PRAMEF4O60810 478 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 WDR47O94967 919 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 TBX6O95947 436 aaPredicted RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 C1GALT1C1LP0DN25 315 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 CD46P15529 392 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 GNAZP19086 355 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 GRNP28799 593 aaKnown RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 EEF1DP29692 281 aaKnown RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 MLF1P58340 268 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 BTN3A2P78410 334 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 ART3Q13508 389 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 RUNX2Q13950 521 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 TGFBIQ15582 683 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 PRAMEF9Q5VWM5 478 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 SP5Q6BEB4 398 aaPredicted RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 FRA10AC1Q70Z53 315 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 GALNTL5Q7Z4T8 443 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 SIAH3Q8IW03 269 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 ARMC10Q8N2F6 343 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 SPATA6LQ8N4H0 392 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 TMEM178AQ8NBL3 297 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 THAP3Q8WTV1 239 aaPredicted RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 GPR137Q96N19 417 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 TMEM79Q9BSE2 394 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 DERL2Q9GZP9 239 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 NSMCE4AQ9NXX6 385 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 LRFN1Q9P244 771 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
LINC01006-204ENST00000435354 TINAGQ9UJW2 476 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 ZNF835Q9Y2P0 537 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 CLDN16Q9Y5I7 305 aa13.44□□□□□ -0.26
LINC01006-204ENST00000435354 CACNA1CQ13936 2221 aa13.43□□□□□ -0.26
LINC01006-204ENST00000435354 A0A0G2JN53 185 aa13.43□□□□□ -0.26
LINC01006-204ENST00000435354 LRIT2A6NDA9 550 aa13.43□□□□□ -0.26
LINC01006-204ENST00000435354 NCF1BA6NI72 391 aaPredicted RBP13.43□□□□□ -0.26
LINC01006-204ENST00000435354 A8MUA0 341 aa13.43□□□□□ -0.26
LINC01006-204ENST00000435354 NCF1CA8MVU1 366 aaPredicted RBP13.43□□□□□ -0.26
LINC01006-204ENST00000435354 NPIPA5E9PKD4 350 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms