RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 DFFAO00273 331 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 PDCD5O14737 125 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 PPEF2O14830 753 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 UBDO15205 165 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DLX3O60479 287 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 IFNGP01579 166 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4L2P0CJ85 424 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4L3P0CJ86 424 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4L4P0CJ87 422 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4L5P0CJ88 424 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4L6P0CJ89 424 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4L7P0CJ90 424 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 TFE3P19532 575 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-205ENST00000435213 ATP6V1B2P21281 511 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 PSMB9P28065 219 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 OMPP47874 163 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 KCNJ3P48549 501 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 MVKQ03426 396 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 FPGSQ05932 587 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 MBTD1Q05BQ5 628 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 TP53BP2Q13625 1128 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 GRM3Q14832 879 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 AGKQ53H12 422 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 MZT2BQ6NZ67 158 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DEGS2Q6QHC5 323 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 VITQ6UXI7 678 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 TPGS1Q6ZTW0 290 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 SLC26A9Q7LBE3 791 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 SHFQ7M4L6 423 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 FSTL5Q8N475 847 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-205ENST00000435213 SPPL2BQ8TCT7 592 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 CANT1Q8WVQ1 401 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 RELTQ969Z4 430 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF558Q96NG5 402 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 P2RY13Q9BPV8 354 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DPH7Q9BTV6 452 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 NKX6-2Q9C056 277 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-205ENST00000435213 CDT1Q9H211 546 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 SEBOXQ9HB31 216 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-205ENST00000435213 TBC1D13Q9NVG8 400 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 GRHPRQ9UBQ7 328 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DUX4Q9UBX2 424 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 AURKCQ9UQB9 309 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 CITO14578 2027 aa7.08□□□□□ -1.28
GARNL3-205ENST00000435213 DICER1Q9UPY3 1922 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 GNG14A0A1W2PPG7 69 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 FAM74A7A6NL05 159 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 NDUFS8O00217 210 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 ARNTLO00327 626 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 UBXN7O94888 489 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 GADD45GO95257 159 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 GOT1P17174 413 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 TPH1P17752 444 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 RAB2AP61019 212 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 RRAS2P62070 204 aaPredicted RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 SLC9A5Q14940 896 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 SMAD1Q15797 465 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 FAM74A3Q4VXF1 159 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 C1orf185Q5T7R7 199 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PRAMEF18Q5VWM3 479 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 LCN8Q6JVE9 175 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 DLK2Q6UY11 383 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PYROXD2Q8N2H3 581 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 RNF149Q8NC42 400 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 REPS2Q8NFH8 660 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 HPDLQ96IR7 371 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 SFXN2Q96NB2 322 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 MIXL1Q9H2W2 232 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 MUC13Q9H3R2 512 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PISDQ9UG56 409 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 OAZ3Q9UMX2 235 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 TNFSF13BQ9Y275 285 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF236Q9UL36 1845 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 DHRS12A0PJE2 317 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 C9orf170A2RU37 121 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 WASHC1A8K0Z3 465 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 M0QZ92 97 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 LDLRAD4O15165 306 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 SELENOFO60613 162 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 RAD1O60671 282 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 ERN1O75460 977 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PTBP3O95758 552 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 ALDH1A1P00352 501 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 IFNA2P01563 188 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 OPN1LWP04000 364 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 SLC35E2BP0CK96 405 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PRPS2P11908 318 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PAX6P26367 422 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 CCR7P32248 378 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 BMP8BP34820 402 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 OSTNP61366 133 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 DEFA5Q01523 94 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 CACNB2Q08289 660 aaPredicted RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 ILKQ13418 452 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 DYRK1AQ13627 763 aa7.07□□□□□ -1.28
GARNL3-205ENST00000435213 USP10Q14694 798 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 GANABQ14697 944 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 PAFAH1B3Q15102 231 aaKnown RBP7.07□□□□□ -1.28
GARNL3-205ENST00000435213 ALG11Q2TAA5 492 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms