RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FBXL6Q8N531 539 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 GOT1L1Q8NHS2 421 aaPredicted RBP18.69■□□□□ 0.58
VRK2-205ENST00000432057 TMEM168Q9H0V1 697 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 MAGIXQ9H6Y5 334 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 KIR3DX1Q9H7L2 352 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 MIEF1Q9NQG6 463 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 C8orf4Q9NR00 106 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 TAAR2Q9P1P5 351 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 GOLGA4Q13439 2230 aaKnown RBP18.68■□□□□ 0.58
VRK2-205ENST00000432057 RASGRP1O95267 797 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 ZNF682O95780 498 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 CST1P01037 141 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 STATHP02808 62 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 SMIM18P0DKX4 95 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 AKT2P31751 481 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 ACTR1BP42025 376 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 MAPK12P53778 367 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 ACTR1AP61163 376 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 MAGEE2Q8TD90 523 aaPredicted RBP18.68■□□□□ 0.58
VRK2-205ENST00000432057 TFAP2CQ92754 450 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 ADI1Q9BV57 179 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 ANKRD60Q9BZ19 345 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 C6orf106Q9H6K1 298 aaPredicted RBP18.68■□□□□ 0.58
VRK2-205ENST00000432057 UBE2ZQ9H832 354 aaPredicted RBP18.68■□□□□ 0.58
VRK2-205ENST00000432057 USP36Q9P275 1121 aaKnown RBP18.68■□□□□ 0.58
VRK2-205ENST00000432057 CORO2BQ9UQ03 480 aa18.68■□□□□ 0.58
VRK2-205ENST00000432057 TRBC2A0A5B9 178 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 HAT1O14929 419 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 CAPN5O15484 640 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 HOXB3P14651 431 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 BCL6P41182 706 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 RPS9P46781 194 aaKnown RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 RGNQ15493 299 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 ALG11Q2TAA5 492 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 FAM180BQ6P0A1 224 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 IYDQ6PHW0 289 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 ABRAXAS1Q6UWZ7 409 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 ANGPTL8Q6UXH0 198 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 PAGE2Q7Z2X7 111 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 UBE3DQ7Z6J8 389 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 NUDT13Q86X67 352 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 OR2L3Q8NG85 312 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 CREB3L4Q8TEY5 395 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 PYURFQ96I23 114 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 SLC35A5Q9BS91 424 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 PHF7Q9BWX1 381 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 SLC6A16Q9GZN6 736 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 AICDAQ9GZX7 198 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 DNAJB9Q9UBS3 223 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 ACSL6Q9UKU0 697 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 COLQQ9Y215 455 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 GMEB1Q9Y692 573 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 COLEC10Q9Y6Z7 277 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 A0A0G2JN53 185 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 TNFAIP8O95379 198 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 IL1RNP18510 177 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 NELFEP18615 380 aaKnown RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 IST1P53990 364 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 CASP9P55211 416 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 SRP54P61011 504 aaKnown RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 MERTKQ12866 999 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 CCDC85BQ15834 202 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 OTUD3Q5T2D3 398 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 RNF220Q5VTB9 566 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.67■□□□□ 0.58
VRK2-205ENST00000432057 EID3Q8N140 333 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 TMEM145Q8NBT3 493 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 RGMAQ96B86 450 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 TM4SF18Q96CE8 201 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 MSANTD3Q96H12 275 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 SPATA9Q9BWV2 254 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 SMPD3Q9NY59 655 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 ZNF624Q9P2J8 865 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 CYP8B1Q9UNU6 501 aa18.67■□□□□ 0.58
VRK2-205ENST00000432057 SAMD4AQ9UPU9 718 aaKnown RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 MAGED1Q9Y5V3 778 aaPredicted RBP18.67■□□□□ 0.58
VRK2-205ENST00000432057 TDRD6O60522 2096 aaKnown RBP18.66■□□□□ 0.58
VRK2-205ENST00000432057 TRBV23OR9-2A0A075B6M9 112 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 EME2A4GXA9 379 aaPredicted RBP18.66■□□□□ 0.58
VRK2-205ENST00000432057 CLEC3AO75596 197 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 IGHV4-34P06331 123 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 MVDP53602 400 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 VAC14Q08AM6 782 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 LRRC32Q14392 662 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 COX20Q5RI15 118 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 WASH2PQ6VEQ5 465 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 FAM47BQ8NA70 645 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 OR5AK3PQ8NH89 298 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 DPH7Q9BTV6 452 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 ABCG4Q9H172 646 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 GPATCH2Q9NW75 528 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 RAPGEFL1Q9UHV5 662 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 KLHL20Q9Y2M5 609 aa18.66■□□□□ 0.58
VRK2-205ENST00000432057 A0A1W2PRB8 838 aa18.65■□□□□ 0.58
VRK2-205ENST00000432057 TNFRSF10CO14798 259 aa18.65■□□□□ 0.58
VRK2-205ENST00000432057 AXIN1O15169 862 aa18.65■□□□□ 0.58
VRK2-205ENST00000432057 PPM1DO15297 605 aa18.65■□□□□ 0.58
VRK2-205ENST00000432057 MAP3K13O43283 966 aa18.65■□□□□ 0.58
VRK2-205ENST00000432057 TMPRSS11DO60235 418 aa18.65■□□□□ 0.58
VRK2-205ENST00000432057 KDM1AO60341 852 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms