RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 IL20RAQ9UHF4 553 aa2.67□□□□□ -1.98
HMGB1P9-201ENST00000429856 STUB1Q9UNE7 303 aa2.67□□□□□ -1.98
HMGB1P9-201ENST00000429856 FAF1Q9UNN5 650 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P9-201ENST00000429856 PLA2G4CQ9UP65 541 aa2.67□□□□□ -1.98
HMGB1P9-201ENST00000429856 NSG2Q9Y328 171 aa2.67□□□□□ -1.98
HMGB1P9-201ENST00000429856 RIPK3Q9Y572 518 aa2.67□□□□□ -1.98
HMGB1P9-201ENST00000429856 TMEM150CB9EJG8 249 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 F8WDY8 70 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 MLNRO43193 412 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PRKNO60260 465 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CTSVO60911 334 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 NOL3O60936 208 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 HSF2BPO75031 334 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PRKRAO75569 313 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 RAD51DO75771 328 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 BAG4O95429 457 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PRAMEF12O95522 483 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PGK2P07205 417 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TSPY4P0CV99 314 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TSPY10P0CW01 314 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 HSPA5P11021 654 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CEACAM1P13688 526 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 MYL6BP14649 208 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 DARSP14868 501 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 NR1D1P20393 614 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CA4P22748 312 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 DNAJB1P25685 340 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PTPN4P29074 926 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 HUNKP57058 714 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SP3Q02447 781 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 LRRC74AQ0VAA2 488 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PPP1R8Q12972 351 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SGCGQ13326 291 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SQLEQ14534 574 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 HERC3Q15034 1050 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TRADDQ15628 312 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 INAQ16352 499 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 RBBP7Q16576 425 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 DUOXA1Q1HG43 343 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ODF4Q2M2E3 257 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 KRTAP24-1Q3LI83 254 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CCDC40Q4G0X9 1142 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ZNF542PQ5EBM4 170 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 DCAF10Q5QP82 559 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 RAET1GQ6H3X3 334 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 IRGCQ6NXR0 463 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TRIM65Q6PJ69 517 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 GPR141Q7Z602 305 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TAF8Q7Z7C8 310 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PHLDB2Q86SQ0 1253 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 NUDT13Q86X67 352 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CDK20Q8IZL9 346 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 EID3Q8N140 333 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 THEM5Q8N1Q8 247 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CIARTQ8N365 385 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 RYBPQ8N488 228 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 MAPKAPK5-AS1Q8N8E1 139 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 MINDY2Q8NBR6 621 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 GMCL1P1Q8NEA9 526 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 OR56B1Q8NGI3 324 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 OR1J1Q8NGS3 322 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CCDC110Q8TBZ0 833 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SELENOMQ8WWX9 145 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 HAS2Q92819 552 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TSACCQ96A04 125 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 FBXO17Q96EF6 278 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 MRPL53Q96EL3 112 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ZNF354BQ96LW1 612 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SGK494Q96LW2 274 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 C17orf62Q9BQA9 187 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 RTP3Q9BQQ7 232 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 FAM213AQ9BRX8 229 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ERP44Q9BS26 406 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 CRACR2AQ9BSW2 395 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ANP32EQ9BTT0 268 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 IDI2Q9BXS1 227 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 LAT2Q9GZY6 243 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ZMYND12Q9H0C1 365 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 DDX47Q9H0S4 455 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 UBQLN3Q9H347 655 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 RWDD1Q9H446 243 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ACTL8Q9H568 366 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TFB2MQ9H5Q4 396 aaKnown RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 DCLRE1BQ9H816 532 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ZBTB20Q9HC78 741 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SDR39U1Q9NRG7 319 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 OLFML3Q9NRN5 406 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 SLC38A7Q9NVC3 462 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 PANK4Q9NVE7 773 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 ANKMY1Q9P2S6 941 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 FAM153AQ9UHL3 310 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 TSPAN16Q9UKR8 245 aa2.66□□□□□ -1.98
HMGB1P9-201ENST00000429856 NPC1L1Q9UHC9 1359 aa2.65□□□□□ -1.98
HMGB1P9-201ENST00000429856 MTMR11A4FU01 709 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 FAM149AA5PLN7 773 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 PRR23AA6NEV1 266 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CHUKO15111 745 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 ATP6V1G1O75348 118 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 GMNNO75496 209 aa2.65□□□□□ -1.99
HMGB1P9-201ENST00000429856 CAVIN2O95810 425 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms