RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KRBA1A5PL33 1030 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 NPIPB15A6NHN6 443 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 RNASET2O00584 256 aaKnown RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 PRRG1O14668 218 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF197O14709 1029 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SCAMP2O15127 329 aaKnown RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 XPNPEP2O43895 674 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 MPZL2O60487 215 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 MITFO75030 526 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 XYLBO75191 536 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SLCO2B1O94956 709 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 GSTM1P09488 218 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 TACR1P25103 407 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 CD6P30203 668 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 CA5AP35218 305 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 GGT2P36268 569 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ALDH9A1P49189 494 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SPINT3P49223 89 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 NEK2P51955 445 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 MLLT10P55197 1068 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 WNT3P56703 355 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 IL1RL1Q01638 556 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF45Q02386 682 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 PTSQ03393 145 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 PIGFQ07326 219 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 HSPA14Q0VDF9 509 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 LMAN2Q12907 356 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 CAMK2GQ13555 558 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 DMC1Q14565 340 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 UGT8Q16880 541 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF181Q2M3W8 571 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ATP13A5Q4VNC0 1218 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 LRRC66Q68CR7 880 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 BRAT1Q6PJG6 821 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM184AQ6ZMB5 413 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 FAM92BQ6ZTR7 304 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 USP43Q70EL4 1123 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 CEP68Q76N32 757 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 GALNT5Q7Z7M9 940 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ANKRD46Q86W74 232 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM173Q86WV6 379 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 PTOV1Q86YD1 416 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 UBALD2Q8IYN6 164 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ADGRG2Q8IZP9 1017 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 MFSD4AQ8N468 514 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 AMER2Q8N7J2 671 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 C11orf65Q8NCR3 313 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 DENND6BQ8NEG7 585 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 KBTBD8Q8NFY9 601 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 RHOXF1Q8NHV9 184 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 WDR20Q8TBZ3 569 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SKA2Q8WVK7 121 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SGCDQ92629 289 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 EFHD2Q96C19 240 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 COQ8BQ96D53 544 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ZHX1-C8orf76Q96EF9 292 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 BHLHE41Q9C0J9 482 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 TPT1P8Q9HAU6 139 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 TRNAU1APQ9NX07 287 aaKnown RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 VNN3Q9NY84 501 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SCHIP1Q9P0W5 487 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SLC25A13Q9UJS0 675 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 ABCG2Q9UNQ0 655 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 SLC22A14Q9Y267 594 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 POFUT2Q9Y2G5 429 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 R4GN57 208 aa8.37□□□□□ -1.07
GABPB1-205ENST00000429662 DOCK8Q8NF50 2099 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 A0A0U1RQS6 177 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 EFCAB9A8MZ26 197 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 C2CD4DB7Z1M9 353 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 WASH3PC4AMC7 463 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 BOLA2-SMG1P6H3BVE0 249 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 AXIN1O15169 862 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ATP6V1G1O75348 118 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 PSIP1O75475 530 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF821O75541 412 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 LRATO95237 230 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CPSF4O95639 269 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CATP04040 527 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ADRB1P08588 477 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 SRCP12931 536 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CD36P16671 472 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 DDX5P17844 614 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 RPL17P18621 184 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 TGM1P22735 817 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 HOXA9P31269 272 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 KRT20P35900 424 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 MAP2K4P45985 399 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CLK1P49759 484 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 PFN3P60673 137 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 SELENOWP63302 87 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 KCNJ10P78508 379 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 VLDLRP98155 873 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 B4GALNT1Q00973 533 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 FCHO2Q0JRZ9 810 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 E2F2Q14209 437 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 IFI44LQ53G44 452 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms