RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SNAP47Q5SQN1 464 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 MED27Q6P2C8 311 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 LRRC70Q7Z2Q7 622 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 FNDC11Q9BVV2 318 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 SUV39H2Q9H5I1 410 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 SIRT5Q9NXA8 310 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 C5AR2Q9P296 337 aa13.24□□□□□ -0.29
SGMS1-203ENST00000429490 SEPT4O43236 478 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ALPPL2P10696 532 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 BMP1P13497 986 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 RACK1P63244 317 aaKnown RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 CEP78Q5JTW2 689 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 DDI2Q5TDH0 399 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 C22orf42Q6IC83 251 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ADNP2Q6IQ32 1131 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 TMEM220Q6QAJ8 160 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 RSPO2Q6UXX9 243 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 CEACAM20Q6UY09 585 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 IQCF1Q8N6M8 205 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 OR2AP1Q8NGE2 309 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 WBP2Q969T9 261 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 TEX12Q9BXU0 123 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ZNF282Q9UDV7 671 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ZNF639Q9UID6 485 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 RIMKLBQ9ULI2 386 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 HCN4Q9Y3Q4 1203 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 CFAP20Q9Y6A4 193 aaKnown RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 GRXCR2A6NFK2 248 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 FAM47E-STBD1D6RA91 191 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ANKRD28O15084 1053 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 SGTAO43765 313 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ADORA3P0DMS8 318 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ATP1B2P14415 290 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 PPP2R1BP30154 601 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 POLR2LP62875 67 aaKnown RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 PRKCZQ05513 592 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 BTG3Q14201 252 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 SHFQ7M4L6 423 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 BCDIN3DQ7Z5W3 292 aaKnown RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 VRK3Q8IV63 474 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 GPR151Q8TDV0 419 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 TRIM63Q969Q1 353 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 CIDECQ96AQ7 238 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 PLD4Q96BZ4 506 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 ZNF300Q96RE9 604 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-203ENST00000429490 SNX7Q9UNH6 387 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 SLC9A8Q9Y2E8 581 aa13.23□□□□□ -0.29
SGMS1-203ENST00000429490 GABRR3A8MPY1 467 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 HAT1O14929 419 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 HOXB6P17509 224 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 AMD1P17707 334 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 TGM1P22735 817 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 PAX3P23760 479 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 TNFSF8P32971 234 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 PTGER1P34995 402 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 MAPK8P45983 427 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 TGM4P49221 684 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 XKP51811 444 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 FBXO43Q4G163 708 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 KDM4DQ6B0I6 523 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 TRIB2Q92519 343 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 COL26A1Q96A83 441 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 RIOK2Q9BVS4 552 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 SMURF1Q9HCE7 757 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 SLC52A3Q9NQ40 469 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 ZNF222Q9UK12 451 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 RTCAO00442 366 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 SSX4O60224 188 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 PTTG1O95997 202 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 UGT8Q16880 541 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 CXorf57Q6NSI4 855 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 ERAP2Q6P179 960 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 ASB18Q6ZVZ8 466 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 ZNF614Q8N883 585 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 GANCQ8TET4 914 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 POP5Q969H6 163 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 NTMT1Q9BV86 223 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 SLIRPQ9GZT3 109 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 OR2A25A4D2G3 310 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 UGT2B17O75795 530 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 ATF6P18850 670 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 CD72P21854 359 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 CSTF2P33240 577 aaKnown RBP eCLIP13.22□□□□□ -0.291e-10■■■■■ 30.5
SGMS1-203ENST00000429490 SLC19A1P41440 591 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 ST8SIA6P61647 398 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 CRHR2Q13324 411 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 RGNQ15493 299 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 GPAT3Q53EU6 434 aa13.22□□□□□ -0.29
SGMS1-203ENST00000429490 CAPN13Q6MZZ7 669 aaPredicted RBP13.22□□□□□ -0.29
SGMS1-203ENST00000429490 TUBA3EQ6PEY2 450 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms