RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 RAPGEFL1Q9UHV5 662 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDH13-202ENST00000428848 BTBD3Q9Y2F9 522 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 PCDHGA2Q9Y5H1 932 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 LYVE1Q9Y5Y7 322 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 NT5C1B-RDH14C9J2C7 533 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 LOC110117498-PIK3R3F6TDL0 507 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 GFYI3L273 518 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ADAM12O43184 909 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SMAD6O43541 496 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 SGTAO43765 313 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TBL1XO60907 577 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SOCS5O75159 536 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SOD2P04179 222 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 C8GP07360 202 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 NUDT7P0C024 238 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 MPC1LP0DKB6 136 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ADORA3P0DMS8 318 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 LAMP1P11279 417 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CSKP41240 450 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 OR3A3P47888 321 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 EPHB3P54753 998 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CSTF3Q12996 717 aaKnown RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 GPR50Q13585 617 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 STARD3Q14849 445 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CNKSR3Q6P9H4 555 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 CAMKMTQ7Z624 323 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 GATAD2AQ86YP4 633 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 GPR26Q8NDV2 337 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 KBTBD8Q8NFY9 601 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 WDR20Q8TBZ3 569 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 WFDC5Q8TCV5 224 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 ZNF675Q8TD23 568 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 PIK3R3Q92569 461 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 RNF170Q96K19 258 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 MAGEB10Q96LZ2 347 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 ZNF558Q96NG5 402 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 KCNC2Q96PR1 638 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 VPS35Q96QK1 796 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 DOHHQ9BU89 302 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 EBPLQ9BY08 206 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 TM6SF2Q9BZW4 377 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 PRDM8Q9NQV8 689 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 SPATA6Q9NWH7 488 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 PAQR5Q9NXK6 330 aaPredicted RBP8.49□□□□□ -1.05
CDH13-202ENST00000428848 BTNL2Q9UIR0 455 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 KLK4Q9Y5K2 254 aa8.49□□□□□ -1.05
CDH13-202ENST00000428848 HMX3A6NHT5 357 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 A8MVJ9 347 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 SLC16A5O15375 505 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 SUV39H1O43463 412 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 TLL1O43897 1013 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 GREM1O60565 184 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 UGDHO60701 494 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 EFCAB14O75071 495 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 ZNF821O75541 412 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 ABLIM3O94929 683 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 CPSF4O95639 269 aaKnown RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 DBTP11182 482 aaKnown RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 ALOX12P18054 663 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 CD22P20273 847 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 GTF2E2P29084 291 aaKnown RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 PCGF2P35227 344 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 GATMP50440 423 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 ATN1P54259 1190 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 UGT2B15P54855 530 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 BCL2L1Q07817 233 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 GPNMBQ14956 572 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 EIF4HQ15056 248 aaKnown RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 SOWAHCQ53LP3 525 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 LIPJQ5W064 366 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 TSPAN33Q86UF1 283 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 TMEM173Q86WV6 379 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 SYT12Q8IV01 421 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 GPR65Q8IYL9 337 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 RNF175Q8N4F7 328 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 DENND6BQ8NEG7 585 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 OR6K2Q8NGY2 324 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 TMCO6Q96DC7 493 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 METTL2AQ96IZ6 378 aaKnown RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 FEVQ99581 238 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 SDHCQ99643 169 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 UQCC2Q9BRT2 126 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 ZNF717Q9BY31 904 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 C6orf62Q9GZU0 229 aaPredicted RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 OR51E2Q9H255 320 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 RNF167Q9H6Y7 350 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDH13-202ENST00000428848 DNAJC11Q9NVH1 559 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 NDUFAF4Q9P032 175 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 HCSTQ9UBK5 93 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 FZD4Q9ULV1 537 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 SLC22A14Q9Y267 594 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 NOSIPQ9Y314 301 aaKnown RBP8.48□□□□□ -1.05
CDH13-202ENST00000428848 PCDHGB6Q9Y5F9 930 aa8.48□□□□□ -1.05
CDH13-202ENST00000428848 PEX16Q9Y5Y5 336 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms