RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SLC34A3Q8N130 599 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 TMEM178AQ8NBL3 297 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 TRPV3Q8NET8 790 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 ANKRD49Q8WVL7 239 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 CCT6BQ92526 530 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 SCMH1Q96GD3 660 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 VPS39Q96JC1 886 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 CTNNAL1Q9UBT7 734 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 ENTPD4Q9Y227 616 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 OARD1Q9Y530 152 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 PCDHGB6Q9Y5F9 930 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 CELSR2Q9HCU4 2923 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 EML6Q6ZMW3 1958 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 A0A0G2JN53 185 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 NCF1BA6NI72 391 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 SAGE2PA6NJ88 616 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 A8MUA0 341 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 NCF1CA8MVU1 366 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 CCDC188H7C350 402 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 TP73O15350 636 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 NCF1P14598 390 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 GDF5P43026 501 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 RPL21P46778 160 aaKnown RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 CASP6P55212 293 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 MRPS25P82663 173 aaKnown RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 CDKL1Q00532 357 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 ALDH6A1Q02252 535 aaKnown RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 ZNF468Q5VIY5 522 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 RPS19BP1Q86WX3 136 aaKnown RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 SRRM1Q8IYB3 904 aaKnown RBP16.01■□□□□ 0.15
TRIM39-209ENST00000428728 ZBED8Q8IZ13 594 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 ELP5Q8TE02 316 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 MAGED4Q96JG8 741 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 FRMD6Q96NE9 622 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 KRT12Q99456 494 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 AICDAQ9GZX7 198 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 RHOJQ9H4E5 214 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 GPAMQ9HCL2 828 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 MOCS1Q9NZB8 636 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 LRFN1Q9P244 771 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 TINAGQ9UJW2 476 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 SNX24Q9Y343 169 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 CREBBPQ92793 2442 aa16.01■□□□□ 0.15
TRIM39-209ENST00000428728 E7ESA3 106 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 NPIPA5E9PKD4 350 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 NEURL1O76050 574 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 SERPINA6P08185 405 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 PRF1P14222 555 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 GRNP28799 593 aaKnown RBP16■□□□□ 0.15
TRIM39-209ENST00000428728 TPP2P29144 1249 aaPredicted RBP16■□□□□ 0.15
TRIM39-209ENST00000428728 PAFAH1B1P43034 410 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 HNMTP50135 292 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 SLC12A2P55011 1212 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 SLBPQ14493 270 aaKnown RBP eCLIP16■□□□□ 0.15
TRIM39-209ENST00000428728 C3AR1Q16581 482 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 MAPKAPK3Q16644 382 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16■□□□□ 0.15
TRIM39-209ENST00000428728 SP5Q6BEB4 398 aaPredicted RBP16■□□□□ 0.15
TRIM39-209ENST00000428728 MRGPRGQ86SM5 289 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 TICAM1Q8IUC6 712 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 LGI4Q8N135 537 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 CA13Q8N1Q1 262 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 HORMAD2Q8N7B1 307 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 FAM98AQ8NCA5 519 aaKnown RBP16■□□□□ 0.15
TRIM39-209ENST00000428728 CREB3L4Q8TEY5 395 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 ANKRD7Q92527 254 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 GPR137Q96N19 417 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 NECTIN3Q9NQS3 549 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 PRDM9Q9NQV7 894 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 SMYD2Q9NRG4 433 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 NSMCE4AQ9NXX6 385 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 NPIPA1Q9UND3 350 aa16■□□□□ 0.15
TRIM39-209ENST00000428728 MYO9AB2RTY4 2548 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 IGKV3D-11A0A0A0MRZ8 115 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 TCRBV16S1A1N1A0A5B0 115 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 ASPDHA6ND91 283 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 SLC25A12O75746 678 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 MLYCDO95822 493 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 SP1P08047 785 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 SMIM10L1P0DMW3 83 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 C1GALT1C1LP0DN25 315 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 GNAZP19086 355 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 HNRNPH1P31943 449 aaKnown RBP15.99■□□□□ 0.15
TRIM39-209ENST00000428728 STXBP1P61764 594 aaKnown RBP15.99■□□□□ 0.15
TRIM39-209ENST00000428728 BTN3A2P78410 334 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 NAA30Q147X3 362 aaPredicted RBP15.99■□□□□ 0.15
TRIM39-209ENST00000428728 FBXO48Q5FWF7 155 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.99■□□□□ 0.15
TRIM39-209ENST00000428728 SPATA6LQ8N4H0 392 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 ARMC2Q8NEN0 867 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 GAL3ST3Q96A11 431 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 RHBDF1Q96CC6 855 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 SMIM10Q96HG1 83 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 PDLIM2Q96JY6 352 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 CAB39LQ9H9S4 337 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 WWOXQ9NZC7 414 aa15.99■□□□□ 0.15
TRIM39-209ENST00000428728 PHGDHO43175 533 aaKnown RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 ZNHIT1O43257 154 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms