RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 GCN1Q92616 2671 aaKnown RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 A0A0A6YYC8 382 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 NSG1A0A0A6YYJ2 146 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 IQANK1A0A1B0GTG1 560 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 EXOC1LA0A1B0GW35 172 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 ANKDD1BA6NHY2 528 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 I3L1I5 382 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 FOXE1O00358 373 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 ALOX12BO75342 701 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 KLHL18O94889 574 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 C8orf89P0DMQ9 161 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 MYBL2P10244 700 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 COX6A1P12074 109 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 RNH1P13489 461 aaKnown RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 OTX2P32243 289 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 SOX11P35716 441 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 KCNC1P48547 511 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 HSD17B7P56937 341 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 DLG1Q12959 904 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 CHAF1BQ13112 559 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 EFTUD2Q15029 972 aaKnown RBP eCLIP8.63□□□□□ -1.033e-6■■■■□ 23.5
SMC1A-203ENST00000428014 TECRLQ5HYJ1 363 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 CATSPEREQ5SY80 951 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 MROH9Q5TGP6 573 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 AGAP7PQ5VUJ5 663 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 GRHL2Q6ISB3 625 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 CMC1Q7Z7K0 106 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 KBTBD2Q8IY47 623 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 KCT2Q8NC54 265 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 M1APQ8TC57 530 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 METTL21AQ8WXB1 218 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 IFT81Q8WYA0 676 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 AGAP4Q96P64 663 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 KCNC2Q96PR1 638 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 TBCDQ9BTW9 1192 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 VN1R1Q9GZP7 353 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 MRPL46Q9H2W6 279 aaKnown RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 ALG9Q9H6U8 611 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 LYRM4Q9HD34 91 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 MMP25Q9NPA2 562 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 TEKT2Q9UIF3 430 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 FBXL4Q9UKA2 621 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 MRPS33Q9Y291 106 aaKnown RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 STK38LQ9Y2H1 464 aa8.63□□□□□ -1.03
SMC1A-203ENST00000428014 MRPS2Q9Y399 296 aaKnown RBP8.63□□□□□ -1.03
SMC1A-203ENST00000428014 TNRC6AQ8NDV7 1962 aaKnown RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 IGKV3D-11A0A0A0MRZ8 115 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 FEZF1A0PJY2 475 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 SEMA3DO95025 777 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ACSL3O95573 720 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 HEXBP07686 556 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 FHP07954 510 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 EPORP19235 508 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 XCR1P46094 333 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CCL11P51671 97 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 PHEXP78562 749 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 RHAGQ02094 409 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 IRF8Q02556 426 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 MFAP5Q13361 173 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CUL3Q13618 768 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 DOC2AQ14183 400 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 SLBPQ14493 270 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 VWA2Q5GFL6 755 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CPZQ66K79 652 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 WDR93Q6P2C0 686 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 MED27Q6P2C8 311 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 TRIM40Q6P9F5 258 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ISLR2Q6UXK2 745 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CHSY3Q70JA7 882 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 PDSS2Q86YH6 399 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 PLD3Q8IV08 490 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF595Q8IYB9 648 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 RIBC1Q8N443 379 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ZADH2Q8N4Q0 377 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 OR9A4Q8NGU2 314 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF473Q8WTR7 871 aaKnown RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 HAS2Q92819 552 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 NXNL1Q96CM4 212 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 MS4A6EQ96DS6 147 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CCDC126Q96EE4 140 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CMTM7Q96FZ5 175 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 TSNARE1Q96NA8 513 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 SERINC2Q96SA4 455 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 CENPKQ9BS16 269 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 NUDT9Q9BW91 350 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 SHCBP1LQ9BZQ2 653 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 REXO4Q9GZR2 422 aaKnown RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 EPS8L2Q9H6S3 715 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 LANCL2Q9NS86 450 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 MAP10Q9P2G4 905 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 PSMC3IPQ9P2W1 217 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 RALYQ9UKM9 306 aaKnown RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF490Q9ULM2 529 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-203ENST00000428014 NFU1Q9UMS0 254 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms