RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 KRT38O76015 456 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SEC24DO94855 1032 aaPredicted RBP12.85□□□□□ -0.35
SNX3-204ENST00000426155 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
SNX3-204ENST00000426155 SERPINA6P08185 405 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 C8orf89P0DMQ9 161 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SMIM10L1P0DMW3 83 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 CXCR2P25025 360 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SOX8P57073 446 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 IRF8Q02556 426 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SLC29A2Q14542 456 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 FAM219BQ5XKK7 198 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 KLC3Q6P597 504 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 CCDC91Q7Z6B0 441 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 TEX9Q8N6V9 391 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 WDR34Q96EX3 536 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SMIM10Q96HG1 83 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SCYL1Q96KG9 808 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 EFCAB11Q9BUY7 163 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 CAPS2Q9BXY5 557 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 RHBGQ9H310 441 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 ANKZF1Q9H8Y5 726 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 LANCL2Q9NS86 450 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 COPG2Q9UBF2 871 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 G3BP2Q9UN86 482 aaKnown RBP12.85□□□□□ -0.35
SNX3-204ENST00000426155 SHANK1Q9Y566 2161 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 PRRC2CQ9Y520 2896 aaKnown RBP12.84□□□□□ -0.35
SNX3-204ENST00000426155 LOC102723996A0A087X1L8 192 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 FOXO6A8MYZ6 492 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 FAM227AF5H4B4 570 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 ERI3O43414 337 aaKnown RBP12.84□□□□□ -0.35
SNX3-204ENST00000426155 KLK8O60259 260 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 B4GALT2O60909 372 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 WFS1O76024 890 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 BTN3A2P78410 334 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 RHAGQ02094 409 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 NAA30Q147X3 362 aaPredicted RBP12.84□□□□□ -0.35
SNX3-204ENST00000426155 IGFBP7Q16270 282 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 SLC6A19Q695T7 634 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 JMJD6Q6NYC1 403 aaPredicted RBP12.84□□□□□ -0.35
SNX3-204ENST00000426155 RPS27LQ71UM5 84 aaKnown RBP12.84□□□□□ -0.35
SNX3-204ENST00000426155 NDUFAF7Q7L592 441 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 GOLGA7Q7Z5G4 137 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 PTGR2Q8N8N7 351 aaPredicted RBP12.84□□□□□ -0.35
SNX3-204ENST00000426155 Q8NA96 180 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 GAL3ST3Q96A11 431 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 MS4A6EQ96DS6 147 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 PHF21BQ96EK2 531 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 LHPPQ9H008 270 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 EHD1Q9H4M9 534 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 NT5DC2Q9H857 520 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 MYO18BQ8IUG5 2567 aa12.84□□□□□ -0.35
SNX3-204ENST00000426155 A0A1W2PQ72 361 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 LRIT2A6NDA9 550 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 ANKDD1BA6NHY2 528 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 DPM1O60762 260 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 CLEC3AO75596 197 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 SORBS2O94875 1100 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 SHBGP04278 402 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 FHP07954 510 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 SNRPAP09012 282 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 SBK3P0C264 359 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 PRR35P0CG20 571 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 PCNAP12004 261 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 EPB42P16452 691 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 CNTFP26441 200 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 EEF1DP29692 281 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 PLA2G16P53816 162 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 ALDH18A1P54886 795 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 STXBP1P61764 594 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 BTG2P78543 158 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 RUNX2Q13950 521 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 E2F2Q14209 437 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 ABRAXAS2Q15018 415 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 LINC00696Q6ZRV3 163 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 MYLK4Q86YV6 388 aaPredicted RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 SIRT6Q8N6T7 355 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 TTLQ8NG68 377 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 BRIX1Q8TDN6 353 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 METTL21AQ8WXB1 218 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 NSUN5Q96P11 429 aaKnown RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 OR1F2PQ96R84 312 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 F2RL3Q96RI0 385 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 WDR77Q9BQA1 342 aaPredicted RBP12.83□□□□□ -0.36
SNX3-204ENST00000426155 ZNF700Q9H0M5 742 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 PRM3Q9NNZ6 103 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 RIC8BQ9NVN3 520 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 TBK1Q9UHD2 729 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 PLAAQ9Y263 795 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 PCDHGB7Q9Y5F8 929 aa12.83□□□□□ -0.36
SNX3-204ENST00000426155 FLNCQ14315 2725 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 URADA6NGE7 173 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 GOLGA8RI6L899 631 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 SAP18O00422 153 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms